LOCUS BC030207 1200 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear receptor subfamily 0, group B, member 2, mRNA
(cDNA clone MGC:34176 IMAGE:5222402), complete cds.
ACCESSION BC030207
VERSION BC030207.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1200)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1200)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: k Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13259502.
FEATURES Location/Qualifiers
source 1..1200
/db_xref="H-InvDB:HIT000040980"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34176 IMAGE:5222402"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1200
/gene="NR0B2"
/gene_synonym="SHP"
/gene_synonym="SHP1"
/db_xref="GeneID:8431"
/db_xref="HGNC:HGNC:7961"
/db_xref="MIM:604630"
CDS 27..800
/gene="NR0B2"
/gene_synonym="SHP"
/gene_synonym="SHP1"
/codon_start=1
/product="nuclear receptor subfamily 0, group B, member 2"
/protein_id="AAH30207.1"
/db_xref="GeneID:8431"
/db_xref="HGNC:HGNC:7961"
/db_xref="MIM:604630"
/translation="MSTSQPGACPCQGAASRPAILYALLSSSLKAVPRPRSRCLCRQH
RPVQLCAPHRTCREALDVLAKTVAFLRNLPSFWQLPPQDQRRLLQGCWGPLFLLGLAQ
DAVTFEVAEAPVPSILKKILLEEPSSSGGSGQLPDRPQPSLAAVQWLQCCLESFWSLE
LSPKEYACLKGTILFNPDVPGLQAASHIGHLQQEAHWVLCEVLEPWCPAAQGRLTRVL
LTASTLKSIPTSLLGDLFFRPIIGDVDIAGLLGDMLLLR"
BASE COUNT 265 a 369 c 316 g 250 t
ORIGIN
1 ctggaagtga gagcagatcc ctaaccatga gcaccagcca accaggggcc tgcccatgcc
61 agggagctgc aagccgcccc gccattctct acgcacttct gagctccagc ctcaaggctg
121 tcccccgacc ccgtagccgc tgcctatgta ggcagcaccg gcccgtccag ctatgtgcac
181 ctcatcgcac ctgccgggag gccttggatg ttctggccaa gacagtggcc ttcctcagga
241 acctgccatc cttctggcag ctgcctcccc aggaccagcg gcggctgctg cagggttgct
301 ggggccccct cttcctgctt gggttggccc aagatgctgt gacctttgag gtggctgagg
361 ccccggtgcc cagcatactc aagaagattc tgctggagga gcccagcagc agtggaggca
421 gtggccaact gccagacaga ccccagccct ccctggctgc ggtgcagtgg cttcaatgct
481 gtctggagtc cttctggagc ctggagctta gccccaagga atatgcctgc ctgaaaggga
541 ccatcctctt caaccccgat gtgccaggcc tccaagccgc ctcccacatt gggcacctgc
601 agcaggaggc tcactgggtg ctgtgtgaag tcctggaacc ctggtgccca gcagcccaag
661 gccgcctgac ccgtgtcctc ctcacggcct ccaccctcaa gtccattccg accagcctgc
721 ttggggacct cttctttcgc cctatcattg gagatgttga catcgctggc cttcttgggg
781 acatgctttt gctcaggtga cctgttccag cccaggcaga gatcaggtgg gcagaggctg
841 gcagtgctga ttcagcctgg ccatccccag aggtgaccca atgctcctgg agggggcaag
901 cctgtataga cagcacttgg ctccttagga acagctcttc actcagccac accccacatt
961 ggacttcctt ggtttggaca cagtgttcca gctgcctggg aggcttttgg tggtccccac
1021 agcctctggg ccaagactcc tgtcccttct tgggatgaga atgaaagctt aggctgctta
1081 ttggaccaga agtcctatcg actttataca gaactgaatt aagttattga tttttgtaat
1141 aaaaggtatg aaacacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//