LOCUS BC030201 1685 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens calcium binding protein 1, mRNA (cDNA clone MGC:34675
IMAGE:5200625), complete cds.
ACCESSION BC030201
VERSION BC030201.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1685)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1685)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: c Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1685
/db_xref="H-InvDB:HIT000040978"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34675 IMAGE:5200625"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1685
/gene="CABP1"
/gene_synonym="CALBRAIN"
/gene_synonym="HCALB_BR"
/db_xref="GeneID:9478"
/db_xref="HGNC:HGNC:1384"
/db_xref="MIM:605563"
CDS 68..1180
/gene="CABP1"
/gene_synonym="CALBRAIN"
/gene_synonym="HCALB_BR"
/codon_start=1
/product="calcium binding protein 1"
/protein_id="AAH30201.2"
/db_xref="GeneID:9478"
/db_xref="HGNC:HGNC:1384"
/db_xref="MIM:605563"
/translation="MGGGDGAAFKRPGDGARLQRVLGLGSRREPRSLPAGGPAPRRTA
PPPPGHASAGPAAMSSHIAKSESKTSLLKAAAAAASGGSRAPRHGPARDPGLPSRRLP
GSCPATPQSSGDPSSRRPLCRPAPREEGARGSQRVLPRAHCRPREALPAAASRPSPSS
PLPPARGRDGEERGLSPALGLRGSLRARGRGDSVPAAASEADPFLHRLRPMLSSAFGQ
DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMN
LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL
LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR"
BASE COUNT 362 a 553 c 548 g 222 t
ORIGIN
1 cgcccccaga tctgcaccgc cagccgccgg gagctccggg ctccgggcgt agaggctgcg
61 ctgtcacatg ggcggcggcg acggggccgc atttaagcgg ccgggggacg gcgcccgcct
121 ccagcgcgtc ctcgggcttg gctcccgccg ggagccccgt tctctgcccg ccgggggccc
181 cgcgccgcgc cgcaccgcgc cgcccccgcc gggccatgcg agcgcgggcc ccgccgcgat
241 gagctcgcac atcgccaaaa gcgagtccaa gacgtcgctg ctgaaggcgg cggcggcggc
301 ggcgagcggg ggcagccggg ctccccgcca cggccctgcc cgggacccgg ggctgcctag
361 ccgccggcta cccggctcct gcccggcgac gccgcagtcg tccggggacc ccagttcgcg
421 gaggcccctg tgccggccgg cgccgcgaga ggagggcgcg cgggggagcc agcgtgtgct
481 cccccgggcg cactgcaggc cccgggaggc gctgccggcc gcggcgtccc gaccttcgcc
541 gtcgtcgccg ctgccgccgg cccgcgggcg ggatggggag gaacggggac tgtccccggc
601 gctcggcctc cggggctctc tgcgagcccg gggccgcggg gactccgttc cagccgccgc
661 gtccgaggcg gacccgttcc tccaccggct gcgccccatg ctcagctccg cctttggcca
721 ggatagatca ctgcgaccag aggaaattga agagctccga gaggccttca gagaattcga
781 caaggacaag gatggctaca tcaactgccg ggatctgggc aactgcatgc gcaccatggg
841 ctacatgccc accgagatgg agctcatcga actgtcccag cagatcaaca tgaacctggg
901 tggccatgta gattttgatg acttcgtgga gctaatgggg cctaaactcc tggcagagac
961 agcagatatg attggtgtaa aggaactgcg agatgctttc cgagagtttg acaccaatgg
1021 tgatggggaa ataagcacca gtgagctgcg agaggctatg aggaagctcc tgggtcatca
1081 ggtgggacac cgagacatag aggaaattat ccgagatgtg gacctcaatg gggatggacg
1141 agtggacttt gaagagtttg tccggatgat gtcccgctga ggccgcgagg gcccctccag
1201 gactgccaag ctcccaaagg cggggctaag aggagctaga gcttgcctca cccgctgtag
1261 ccgccgagag cccaggatgt actggcggat ggggcctgcc tgcaccccgg ggaggcgccc
1321 accccggacc cccacccctc cgcactgtga aagactaact cctgcaactg gaaagcgggg
1381 gcgcccgccg acgaggaggc caccgtgcca agccggcaga ggtcatgcca ggcgccaagg
1441 gccatgtgcc cagctgctgc tggctgggtg ggccagggag cccgccagca gaccccacac
1501 agcatgtccg ccccagggca aagcctccca ccttcgctct gcgcccgtcc cagctcgcct
1561 cagccctgtt atctcagaac caataaaaat atttccaaga gcaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaa
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