LOCUS BC030201 1685 bp mRNA linear HUM 11-APR-2007 DEFINITION Homo sapiens calcium binding protein 1, mRNA (cDNA clone MGC:34675 IMAGE:5200625), complete cds. ACCESSION BC030201 VERSION BC030201.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1685) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1685) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 49 Row: c Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1685 /db_xref="H-InvDB:HIT000040978" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34675 IMAGE:5200625" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1685 /gene="CABP1" /gene_synonym="CALBRAIN" /gene_synonym="HCALB_BR" /db_xref="GeneID:9478" /db_xref="HGNC:HGNC:1384" /db_xref="MIM:605563" CDS 68..1180 /gene="CABP1" /gene_synonym="CALBRAIN" /gene_synonym="HCALB_BR" /codon_start=1 /product="calcium binding protein 1" /protein_id="AAH30201.2" /db_xref="GeneID:9478" /db_xref="HGNC:HGNC:1384" /db_xref="MIM:605563" /translation="MGGGDGAAFKRPGDGARLQRVLGLGSRREPRSLPAGGPAPRRTA PPPPGHASAGPAAMSSHIAKSESKTSLLKAAAAAASGGSRAPRHGPARDPGLPSRRLP GSCPATPQSSGDPSSRRPLCRPAPREEGARGSQRVLPRAHCRPREALPAAASRPSPSS PLPPARGRDGEERGLSPALGLRGSLRARGRGDSVPAAASEADPFLHRLRPMLSSAFGQ DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMN LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR" BASE COUNT 362 a 553 c 548 g 222 t ORIGIN 1 cgcccccaga tctgcaccgc cagccgccgg gagctccggg ctccgggcgt agaggctgcg 61 ctgtcacatg ggcggcggcg acggggccgc atttaagcgg ccgggggacg gcgcccgcct 121 ccagcgcgtc ctcgggcttg gctcccgccg ggagccccgt tctctgcccg ccgggggccc 181 cgcgccgcgc cgcaccgcgc cgcccccgcc gggccatgcg agcgcgggcc ccgccgcgat 241 gagctcgcac atcgccaaaa gcgagtccaa gacgtcgctg ctgaaggcgg cggcggcggc 301 ggcgagcggg ggcagccggg ctccccgcca cggccctgcc cgggacccgg ggctgcctag 361 ccgccggcta cccggctcct gcccggcgac gccgcagtcg tccggggacc ccagttcgcg 421 gaggcccctg tgccggccgg cgccgcgaga ggagggcgcg cgggggagcc agcgtgtgct 481 cccccgggcg cactgcaggc cccgggaggc gctgccggcc gcggcgtccc gaccttcgcc 541 gtcgtcgccg ctgccgccgg cccgcgggcg ggatggggag gaacggggac tgtccccggc 601 gctcggcctc cggggctctc tgcgagcccg gggccgcggg gactccgttc cagccgccgc 661 gtccgaggcg gacccgttcc tccaccggct gcgccccatg ctcagctccg cctttggcca 721 ggatagatca ctgcgaccag aggaaattga agagctccga gaggccttca gagaattcga 781 caaggacaag gatggctaca tcaactgccg ggatctgggc aactgcatgc gcaccatggg 841 ctacatgccc accgagatgg agctcatcga actgtcccag cagatcaaca tgaacctggg 901 tggccatgta gattttgatg acttcgtgga gctaatgggg cctaaactcc tggcagagac 961 agcagatatg attggtgtaa aggaactgcg agatgctttc cgagagtttg acaccaatgg 1021 tgatggggaa ataagcacca gtgagctgcg agaggctatg aggaagctcc tgggtcatca 1081 ggtgggacac cgagacatag aggaaattat ccgagatgtg gacctcaatg gggatggacg 1141 agtggacttt gaagagtttg tccggatgat gtcccgctga ggccgcgagg gcccctccag 1201 gactgccaag ctcccaaagg cggggctaag aggagctaga gcttgcctca cccgctgtag 1261 ccgccgagag cccaggatgt actggcggat ggggcctgcc tgcaccccgg ggaggcgccc 1321 accccggacc cccacccctc cgcactgtga aagactaact cctgcaactg gaaagcgggg 1381 gcgcccgccg acgaggaggc caccgtgcca agccggcaga ggtcatgcca ggcgccaagg 1441 gccatgtgcc cagctgctgc tggctgggtg ggccagggag cccgccagca gaccccacac 1501 agcatgtccg ccccagggca aagcctccca ccttcgctct gcgcccgtcc cagctcgcct 1561 cagccctgtt atctcagaac caataaaaat atttccaaga gcaaaaaaaa aaaaaaaaaa 1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1681 aaaaa //