LOCUS BC030200 1676 bp mRNA linear HUM 04-JUL-2008 DEFINITION Homo sapiens family with sequence similarity 171, member A2, mRNA (cDNA clone IMAGE:5200498), complete cds. ACCESSION BC030200 VERSION BC030200.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1676) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1676) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 49 Row: c Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: GenomeScan gene prediction This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1676 /db_xref="H-InvDB:HIT000040977" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5200498" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1676 /gene="FAM171A2" /db_xref="GeneID:284069" /db_xref="HGNC:HGNC:30480" CDS 338..583 /gene="FAM171A2" /codon_start=1 /product="FAM171A2 protein" /protein_id="AAH30200.1" /db_xref="GeneID:284069" /db_xref="HGNC:HGNC:30480" /translation="MCLGTGLCWQLAPQTQRVWPPCPSVIAWAPGCWSLLPALASSPT LCPGVLTSCPCMRLSASTCSLSGRPRSSSMRTWCTFS" BASE COUNT 226 a 624 c 543 g 283 t ORIGIN 1 cggctccggt cggagacaat cgcgctgagc gggcgccgca gcgggagcgg gagccggagc 61 tgcgaggcgc ggcgcagagc tggggctgcg cggggccggg cgagcgggac caggcgggag 121 ccatggaccg ctagggcccg gcctagcccc gcgatgccgc cggcgagtgg ccccagcgtc 181 ctcgcgcggc tgttgccgct gctggggctg ctgctcggca gcgcctcccg ggctcccggc 241 aagtcgccgc cggagccccc cagcccgcag gagatcctga tcaaggtgca ggtgtatgtg 301 agcggggagc tggtgcccct ggcccgggcc tcagtggatg tgtttgggaa ccggactctg 361 ctggcagctg gcaccacaga ctcagagggt gtggccaccc tgcccctcag ttatcgcttg 421 ggcacctggg tgctggtcac tgctgcccgc cctggcttcc tcaccaactc tgtgccctgg 481 cgtgttgaca agctgccctt gtatgcgtct gtcagcctct acctgctccc tgagcggccg 541 gccacgctca tcctctatga ggacctggtg cacattctcc taggctctcc cggtgcccgc 601 tcccagccct tggtgcagtt ccagcgccgg gctgcccgcc tgcctgtcag ctccacctac 661 agccagctct gggcgtcact tacgcctgcc agcacccagc aggaaatgcg ggctttccct 721 gccttcctgg gcactgaggc ctccagctca ggcaatggct cctggctgga gctgatgccc 781 ctgactgctg tgagcgtgca cctgctgaca ggtaatggga cagaggtgcc gctctcaggc 841 cccattcacc tgtccctgcc cgtgccctcc gagactcgtg ccctcaccgt gggcaccagc 901 attccagcct ggagatttga ccccaagagt gggctgtggg tgcgcaatgg cactggtgta 961 atccggaagg aaggccggca gctctactgg accttcgtct ccccccagct ggggtactgg 1021 gtggccgcca tggcctcccc cacggctggg ctggtcacca tcacgtcggg catccaggac 1081 atcggcacct accacaccat cttcttgctc accatcctgg cagccctggc cctgctggtg 1141 cttatcctgc tgtgtctgct catctactac tgccggaggc gctgcctgaa gccgaggcaa 1201 cagcaccgca agctgcagct ctcggggccc tctgacggta acaaacgaga ccaggccacc 1261 tcgatgtccc agctccacct catctgtggg ggacccctgg aacccgcccc gtcgggggac 1321 cccgaggctc cgcctccagg ccccctccac tcggccttct ccagctcccg ggacttggcc 1381 tcctcccggg atgacttctt ccgcaccaag ccgcgctctg ccagccgccc ggccgccgag 1441 ccttcgggtg cccgcggggg cgagagcgcc gggctcaagg gcgctcgctc ggccgagggc 1501 cccggcgggc tggagcccgg cctagaggag caccggcggg ggccctcggg ggctgcggcc 1561 ttcctgcacg agccgccctc gccgccgccg cccttcgacc actacctggg ccacaagggg 1621 gcggccgagg gcaagacccc cgacttcctg ctgtcgcagt cggtggacca gctggc //