LOCUS BC030018 1895 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens RNA binding motif protein, Y-linked, family 1, member F, mRNA (cDNA clone MGC:33094 IMAGE:5269012), complete cds. ACCESSION BC030018 VERSION BC030018.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1895) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1895) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC030018.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: n Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34303936. FEATURES Location/Qualifiers source 1..1895 /db_xref="H-InvDB:HIT000040934_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33094 IMAGE:5269012" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1895 /gene="RBMY1F" /gene_synonym="MGC33094" /gene_synonym="YRRM2" /db_xref="GeneID:159163" /db_xref="HGNC:HGNC:23974" CDS 113..1603 /gene="RBMY1F" /gene_synonym="MGC33094" /gene_synonym="YRRM2" /codon_start=1 /product="RNA binding motif protein, Y-linked, family 1, member F" /protein_id="AAH30018.1" /db_xref="GeneID:159163" /db_xref="HGNC:HGNC:23974" /translation="MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRT SKSRGFAFITFENPADAKNAAKDMNGTSLHGKAIKVEQAKKPSFQSGGRRRPPASSRN RSPSGSLRSARGSSGGTRGWLPSHEGHLDDGGYTPDLKMSYSRGLIPVKRGPSSRSGG PPPKKSAPSAVARSNSWMGSQGPMSQRRENYGVPPRRATISSWRNDRMSTRHDGYATN DGNHPSCQETRDYAPPSRGYAYRDNGHSNRDEHSSRGYRNHRSSRETRDYAPPSRGHA YRDYGHSRRDESYSRGYRNHRSSRETREYAPPSRGHGYRDYGHSRRHESYSRGYRNHP SSRETRDYAPPHRDYAYRDYGHSSWDEHSSRGYSYHDGYGEALGRDHSEHLSGSSYRD ALQRYGTSHGAPPARGPRMSYGGSTCHAYSNTRDRYGRSWESYSSCGDFHYCDREHVC RKDQRNPPSLGRVLPDPREAYGSSSYVASIVDGGESRSEKGDSSRY" BASE COUNT 588 a 364 c 451 g 492 t ORIGIN 1 agctccagct gtccctcccg cagttggccc tgtggtgttc cgaagccggt tacgtacggc 61 ctgagggcca ggcgaacctc aggctctttg tcctactaaa aagcgcagca caatggtaga 121 agcagatcat cctggcaagc ttttcattgg tggcctcaat agagaaacca atgagaagat 181 gcttaaagca gtatttggga aacatggtcc catatcagaa gttcttttga taaaggatcg 241 aaccagcaaa tccagaggct ttgcatttat tacttttgag aaccctgcag atgctaagaa 301 tgctgcgaaa gatatgaatg gaacgtcttt gcatggaaaa gcaataaaag tagaacaagc 361 caagaaacca tcttttcaaa gtggtggtag gcggagacca ccagcttctt cgagaaacag 421 aagcccttca ggaagtctga gatctgcaag aggaagcagt ggaggaacaa gagggtggct 481 tccctcacat gaagggcacc tggatgatgg tggatacact cctgatctca agatgagtta 541 ttctagggga ctcattccag ttaaaagagg tccatcttca agaagtggag gtcctcctcc 601 gaaaaaatct gctccttctg ctgtggcaag aagcaatagt tggatgggaa gccaaggtcc 661 catgtcacaa agaagagaga attatggagt tcctccacgc agagcgacaa tatcttcctg 721 gagaaatgat cgcatgtcaa caagacatga tggttatgca actaacgatg gaaatcatcc 781 aagttgccaa gaaacgaggg attatgctcc accatctaga ggctatgcat accgtgataa 841 tggtcattct aatcgggatg aacattcctc tagaggatat agaaatcatc gaagttcccg 901 agaaactagg gattatgctc caccatctag aggccatgca taccgtgatt atggtcattc 961 tcgtcgggat gaaagttatt ctagaggata cagaaatcat cgaagttccc gagaaactag 1021 ggagtatgct ccaccatcta gaggccatgg ataccgtgat tatggtcatt ctcgtcgaca 1081 tgaaagttat tctagaggat atagaaatca tccaagttcc cgagaaacca gggattatgc 1141 tccaccacat agagactatg cataccgtga ttatggtcat tctagttggg atgaacattc 1201 ctctagagga tatagttatc atgatggcta cggtgaggcc cttggtagag atcattctga 1261 acatctaagt ggaagttctt atagagatgc acttcagaga tacgggacct ctcatggtgc 1321 accacctgca agagggcctc ggatgtctta tggtggaagc acctgccacg catatagtaa 1381 tacacgagat agatatggca gaagttggga gagttactcg agctgtggtg attttcatta 1441 ttgtgatcgt gagcatgttt gcagaaaaga ccaaaggaat ccgccttctc tgggtagggt 1501 gctccctgat cctcgtgaag catatggtag ctcaagttat gtggcatcta tagtagatgg 1561 tggggagagt cgatctgaaa aaggagactc gagcagatat taaagcaagc attgaaaata 1621 atagttattg cataccaatc cttgtttgca aatcaaaaat tgaaatgtta tttctgcatt 1681 gttacctgca tattactgaa agaaacatgt tggttttgtg gagagaggta gatactaact 1741 tcctccatga attttttgag gtattcaaag gaaaaggaat tgttttcaaa gtaatttcat 1801 acttgttgat gctatttgaa aagtgtttag atgtaatatc taccttaaaa ttttcacaat 1861 aaaattttac atgtactgca aaaaaaaaaa aaaaa //