LOCUS BC029924 3371 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens family with sequence similarity 78, member A, mRNA
(cDNA clone IMAGE:5112530), partial cds.
ACCESSION BC029924
VERSION BC029924.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3371)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3371)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC029924.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: g Column: 14.
FEATURES Location/Qualifiers
source 1..3371
/db_xref="H-InvDB:HIT000040925"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5112530"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3371
/gene="FAM78A"
/gene_synonym="FLJ00024"
/db_xref="GeneID:286336"
CDS <1..606
/gene="FAM78A"
/gene_synonym="FLJ00024"
/codon_start=1
/product="FAM78A protein"
/protein_id="AAH29924.2"
/db_xref="GeneID:286336"
/translation="LGSLQPLPPRFKRFSCLSLPSSWDYRSSWELPDLQEGKIQAISD
SDGVNYPWYGNTTETCTIVGPTKRDSKFIISMNDNFYPSVTWAVPVSESNVAKLTNIY
RDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIEVNPNRPLGQRARLREPIAQDQPKI
LSKNEPIPPSALVKPNANDAQVLMWRPKYGQPLVVIPPKHR"
BASE COUNT 725 a 1046 c 914 g 686 t
ORIGIN
1 ctcggctcac tgcaacctct gcctcccagg ttcaagcgat tctcctgcct cagcctcccg
61 agtagctggg attacaggtc cagctgggag ctccccgacc tccaggaggg caagatccaa
121 gccatcagcg actcggatgg ggtgaactac ccctggtacg gcaacaccac agagacctgc
181 accatcgtgg gccccaccaa gagggactcc aagttcatca tcagcatgaa tgacaacttt
241 taccccagcg tcacatgggc cgtgcccgtc agcgagagca acgtggccaa gctcaccaat
301 atctaccggg accagagctt caccacctgg ctggtggcca ccaacacctc caccaacgac
361 atgatcatcc tgcagacgct gcactggcgc atgcagctca gcatcgaggt gaaccccaac
421 cggcccctgg gccagcgcgc ccggctgcgg gagcccatcg cccaggacca gcccaaaatc
481 ctgagcaaga atgagcccat cccgcccagc gccctggtca agcccaatgc caacgatgcc
541 caggtcctca tgtggcggcc caagtacggg cagccgctgg tggtgatccc gcccaagcac
601 cggtgacagc caggaccacc cgctaggtta gactcacaaa taataatacc gctgaaaaca
661 aaactcagac tcactcttca gtcattcagc aagatacaac cattctaccc tctccagcgg
721 gcggatctca ctgtgctgat gcccccggga aggcctcccc ggctctcggc acctgcttcc
781 tttcagggag aggggagatc taagcaggac agacagaccc cacgtgcgcc ctcagggtga
841 cctctggtct ccttgcctct cctttttctc agtttcagtc gctcacttgt aacagattcc
901 ctgaaacact gctttttccg ttttttaaaa aaactcctct tttgggggct caggggcagg
961 aggaggggga gctgattagg agggaagctc cagcccccga tcaaagagac agatccacac
1021 tgctgccgat ttgtggcgct ggccggcctt ccccccaggt ccctccgccc tctgtcatgc
1081 ggccttatgt agacttgctt tgccaaactt ttgccttaag ctgaattgaa aggaagaaaa
1141 ccaatcggag aaagaaagca ggatctcttt tctaccggac ttttcctctt ctgccagagg
1201 tggagggagg gttggggtcg cccgcgagag tctcttgagc ccttcttccc ggttgtcttg
1261 ggagaagggt gaggatgggc atttagaccc gaaaccagct gctcactctt tctttttggc
1321 agaaataaaa ccacaggtag attctgcctg aacagcccct tctctccctc cacccccagg
1381 tcgtatccct gcacctgcgg agaggggctg tgagctctgg cggggggtgg ctccaccagt
1441 cgcctggcct cttctcccct ctcttcccag cagccttaac ttcccttggg cggctctagg
1501 aggagagagg caggctcctg tgagcccagg gaattttcac cctctcagtc ctcaggaccc
1561 acccccagtt gagtccctgg cccttcctcc aggtgtgtgg ctttttcctt ctccatccac
1621 actggtccca aatgcctggg ggccggccac ctggaccgcc gacacacagc ctcaatgtta
1681 gtctcaaagg taaggaaggc attcacgtcc cttcttgcag ggcattttaa gacttgaatc
1741 gggtgggccc cggcccctgt ggctggctgg cccctggtgt actgtaaaag ggccaagaca
1801 gggctcgttc tcaggggcgc ccctcccagg ccctcagggc agcgggacgg tgcagtcagg
1861 ctctgggtgc cacagtgatg gaggtggaag gcacccaagc tctagggaag tcttgggagg
1921 cagtcggccg agcccctgct tcctgtcctc aaataagtga atccaggcca agggctggga
1981 gggctgggtg ggcttatcgt cgagagggtt cagagccact ctggaggctg ggctggcaca
2041 gtggagagca acaggtgagg acagacgtct ggaagcccat ccctgggacc tgccctccct
2101 cggtcccagg tcactggagc tccagggctt acttagtcct gacccattgt gccagggttc
2161 tgagcagtgt cggccttgtg gccacttgca ggggctatta ggggacatcc cgctgaagcc
2221 acgctccttc cagcttgcca aacccacagc tacccgcccg ggacccacac tcagcctaat
2281 aattatcaag cacagaaaac cgtccattta gaaaaataat ccatttctgc tgcagatgag
2341 ccacttgtaa gagtctccgt gacagcgtgg gacggtgtgg gaaccaaagt ccctgccctg
2401 ctcctttgtc cacgggctat tgcgtttatt caaggggtgc ttaatgaccg tttagccact
2461 gccgtcggtc tccgggccca gctcgtgcca ggaggctgtc ctgggacaca ctgggctgga
2521 gctgccggct ggcacggtgc tcagggggcc cctgatgggg gccaggacct ccccgcagaa
2581 actgcaggtt ctcttgtgag gatggaggcc gtgccacccc gaaaggcagt agccttaggg
2641 gaacagtggg tcccagctgc atgtctgagg atgggtgggg acagggctgg gactcagctt
2701 tcattcactg gagacttctc cactcaggtc tttgttgcac taaagcaggg acaggaccct
2761 gggggttcag gaagcgggtc tcaggccgct ggtttattcc tggaggtggg gctggagacc
2821 agaatggaaa ggggcttcct gagctgctag ggggtgaagg acccccgaac ccgcatttct
2881 tgagtgagag caaacactcg aggcaggagc cagcacccct cccactgcat gcccggcccc
2941 cagcccacct tgccccctga cccaccttca cccgtgcccc ttctttctgc ccttcctcac
3001 cgaagaaggg ctaggaacac cctggagagg ctgcaggtcc ggccacggac gctcagctga
3061 gccccggtct gctccttcag cctccttgct catgttggag cacaggcccc aggcttcctg
3121 ccagggcccc gattcttctt atgtcctcca gccccgccct ggcgtggaca tccactcact
3181 ccttccagca ataagaaccg tccttggtcg tggagagtac tgtgaaacaa accaatgcac
3241 ttaccaggag gcacaagact cttgaagaag atgtacaatg aacctttttt tttttacaaa
3301 aaacaaaaag caaatattca taaagagaaa taaaatgtaa ttttaaagta aaaaaaaaaa
3361 aaaaaaaaaa a
//