LOCUS BC029901 1495 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Norrie disease (pseudoglioma), mRNA (cDNA clone
MGC:34503 IMAGE:5179578), complete cds.
ACCESSION BC029901
VERSION BC029901.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1495)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1495)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557788.
FEATURES Location/Qualifiers
source 1..1495
/db_xref="H-InvDB:HIT000040919"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34503 IMAGE:5179578"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1495
/gene="NDP"
/gene_synonym="FEVR"
/gene_synonym="ND"
/db_xref="GeneID:4693"
/db_xref="HGNC:HGNC:7678"
/db_xref="MIM:310600"
CDS 17..418
/gene="NDP"
/gene_synonym="FEVR"
/gene_synonym="ND"
/codon_start=1
/product="Norrie disease (pseudoglioma)"
/protein_id="AAH29901.1"
/db_xref="GeneID:4693"
/db_xref="HGNC:HGNC:7678"
/db_xref="MIM:310600"
/translation="MRKHVLAASFSMLSLLVIMGDTDSKTDSSFIMDSDPRRCMRHHY
VDSISHPLYKCSSKMVLLARCEGHCSQASRSEPLVSFSTVLKQPFRSSCHCCRPQTSK
LKALRLRCSGGMRLTATYRYILSCHCEECNS"
BASE COUNT 433 a 319 c 326 g 417 t
ORIGIN
1 gtttttcctt acaacaatga gaaaacatgt actagctgca tccttttcta tgctctccct
61 gctggtgata atgggagata cagacagtaa aacggacagc tcattcataa tggactcgga
121 ccctcgacgc tgcatgaggc accactatgt ggattctatc agtcacccat tgtacaagtg
181 tagctcaaag atggtgctcc tggccaggtg cgaggggcac tgcagccagg cgtcacgctc
241 cgagcctttg gtgtcgttca gcactgtcct caagcaaccc ttccgttcct cctgtcactg
301 ctgccggccc cagacttcca agctgaaggc actgcggctg cgatgctcag ggggcatgcg
361 actcactgcc acctaccggt acatcctctc ctgtcactgc gaggaatgca attcctgagg
421 cccgctgctg tgtgtggctt ctggatggga caactgtaga ggcagttcga ccagccaggg
481 aaagactggc aagaaaagag ttaaggcaaa aaaggatgca acaattctcc cgggactctg
541 catattctag taataaagac tctacatgct tgttgacaga gagagatact ctgggaactt
601 ctttgcagtt cccatctcct ttctctggta caatttcttt tggttcattt tcagattcag
661 gcattttccc ccttggctct caatgctgtt tgggtttcca acaattcagc attagtggga
721 aaaagtgggc cctcatacac aagcgtgtca ggctctcagt gtttggtgca cgctggggaa
781 gaatttactt tggaaagtag aaaagcccag cttttcctgg gacatcttct gttattgttg
841 atgttttttt ttaccttgtc attttggtct aaggttgcca ttgctgctaa aggttaccga
901 tttcaaagtc cagataccaa gcatgtggat atgtttagct acgtttactc acagccagcg
961 aactgacatt aaaataacta acaaacagat tcttttatgt gatgctggaa ctcttgacag
1021 ctataattat tattcagaaa tgactttttg aaagtaaaag cagcataaag aatttgtcac
1081 aggaaggctg tctcagataa attatggtaa aattttgtaa gggagcagac ttttaaagac
1141 ttgcacaaat acggatcctg cactgactct ggaaaaggca tatatgtact agtggcatgg
1201 agaatgcacc atactcatgc atgcaaatta gacaaccaag tatgaatcta tttgtgggtg
1261 tgctatagct ttagccgtgt cacgggcatc attctctaat atccacttgt ccatgtgaaa
1321 catgttgcca aaatggtggc ctggcttgtc ttctgaacgt ttggttcaaa tgtgttttgg
1381 tcctggaggc tcaaattttg agttattccc acgttttgaa ataaaaagag tatattcaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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