LOCUS BC029887 1172 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens cytokine-dependent hematopoietic cell linker, mRNA
(cDNA clone IMAGE:5171424), complete cds.
ACCESSION BC029887
VERSION BC029887.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1172)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1172)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: f Column: 17
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1172
/db_xref="H-InvDB:HIT000091931"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5171424"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1172
/gene="CLNK"
/gene_synonym="MIST"
/db_xref="GeneID:116449"
/db_xref="HGNC:HGNC:17438"
/db_xref="MIM:611434"
CDS 294..803
/gene="CLNK"
/gene_synonym="MIST"
/codon_start=1
/product="CLNK protein"
/protein_id="AAH29887.1"
/db_xref="GeneID:116449"
/db_xref="HGNC:HGNC:17438"
/db_xref="MIM:611434"
/translation="MNKPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQSIKIL
PARPIKESEYADTHYFKVAMDTPLPLDTRTSISIGQPTWNTQTRLERVDKPISKDVRS
QNIKGDASVRKNKIPLPPPRPLITLPKKYQPLPPEPESSRPPLSQRHTFPEVQRMPSQ
ISLRDLSEP"
BASE COUNT 399 a 280 c 263 g 230 t
ORIGIN
1 gacaaagtca tgccagtcct tccatactgg cagttttaat ttttacgaaa ccacattctt
61 cacgatgcct gatgctgtgc agaagagcgt agtctagaag aaagaacacg gattttggag
121 acaggcattc ctctcaaccc caaacctgcc atctcctagc catgtaactt tggacaaggg
181 gcaatagaaa gacaactaaa gaaggatcca acgatttgaa attccagaac ttcagtctgc
241 caaaaaacag gtcatggcct cgcatcaata gtgccacagg ccagtaccag aggatgaaca
301 agcctcttct agactgggaa agaaactttg ctgcagtcct ggatggagca aaaggccaca
361 gtgatgatga ctatgatgac cctgagcttc ggatggaaga gacatggcag tcgattaaaa
421 ttttaccagc ccggcctata aaggaatctg aatatgcaga tacacactat ttcaaggttg
481 caatggacac tccccttccg ttagacacca ggacctctat ctccattgga cagccgacct
541 ggaacacaca gacgaggttg gaaagagtgg acaaacccat ttccaaggac gtcagaagcc
601 aaaacattaa aggagatgca tccgtaagaa agaacaagat tcctttacca cctcctcggc
661 ctctcataac acttccgaag aagtaccaac ccttgccccc tgagccggag agcagcaggc
721 cacctttatc tcagagacac acctttccag aagtccagag aatgcccagt cagataagct
781 taagggactt aagtgagcca taaaataggg atgggggcca ggtgcagtgg ctcacgcctg
841 taatcccagc actttgggag gccgaggtgg gcggatcacc tgaggtcagg ggttcaagat
901 cagcctgacc aacatgaaga aaccccatct ctacaaaaaa tacaaaatta gccaggtgtg
961 gtggcgcatg cctgtaatcc cagccacgct actcgggagg ctgaggaagg agaatcgctt
1021 gaacccagga ggcagaggtt acggtgagcc aagatcatgc cattgtactc cagcttgggc
1081 aacaagagcg aagctccatc tcaaaataaa taaattaatt aaataaataa aaataaaata
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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