LOCUS BC029864 1630 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hyaluronan and proteoglycan link protein 2, mRNA (cDNA
clone MGC:34219 IMAGE:5174906), complete cds.
ACCESSION BC029864
VERSION BC029864.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1630)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: k Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46852179.
FEATURES Location/Qualifiers
source 1..1630
/db_xref="H-InvDB:HIT000040902"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34219 IMAGE:5174906"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1630
/gene="HAPLN2"
/gene_synonym="BRAL1"
/db_xref="GeneID:60484"
/db_xref="HGNC:HGNC:17410"
CDS 205..1227
/gene="HAPLN2"
/gene_synonym="BRAL1"
/codon_start=1
/product="hyaluronan and proteoglycan link protein 2"
/protein_id="AAH29864.1"
/db_xref="GeneID:60484"
/db_xref="HGNC:HGNC:17410"
/translation="MPGWLTLPTLCRFLLWAFTIFHKAQGDPASHPGPHYLLPPIHEV
IHSHRGATATLPCVLGTTPPSYKVRWSKVEPGELRETLILITNGLHARGYGPLGGRAR
MRRGHRLDASLVIAGVRLEDEGRYRCELINGIEDESVALTLSLEGVVFPYQPSRGRYQ
FNYYEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLTARAPCGGR
GRPGIRSYGPRDRMRDRYDAFCFTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVG
HLYAAWKFSGLDQCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGT
YCYAEN"
BASE COUNT 327 a 545 c 512 g 246 t
ORIGIN
1 ttgcaaaggc aatgcgcact caggcaccag agggcagagg ggctcaagtt ccagggtttt
61 aaggtgcttg gaactcccag gagcctggca aaccttcatc cagaacctct tcctcaagca
121 agacaaaaag ctgctaagca ctgctccctc cgtctctgtg aagagaccag cttctaacag
181 acggtgccgg gctgaccccc catcatgcca ggctggctca ccctccccac actctgccgc
241 ttccttcttt gggccttcac catcttccac aaagcccaag gagacccagc atcccacccg
301 ggcccccact acctcctgcc ccccatccac gaggtcattc actctcatcg tggggccacg
361 gccacgctgc cctgcgtcct gggcaccacg cctcccagct acaaggtgcg ctggagcaag
421 gtggagcctg gggagctccg ggaaacgctg atcctcatca ccaacggact gcacgcccgg
481 gggtatgggc ccctgggagg gcgcgccagg atgcggaggg ggcatcgact agacgcctcc
541 ctggtcatcg cgggcgtgcg cctggaggac gagggccggt accgctgcga gctcatcaac
601 ggcatcgagg acgagagcgt ggcgctgacc ttgagcttgg agggtgtggt gtttccgtac
661 caacccagcc ggggccggta ccagttcaat tactacgagg cgaagcaggc gtgcgaggag
721 caggacggac gcctggccac ctactcccag ctctaccagg cttggaccga gggtctggac
781 tggtgtaacg cgggctggct gctcgagggc tccgtgcgct accctgtgct caccgcacgc
841 gccccgtgcg gcggccgagg ccggcccggg atccgcagct acggaccccg cgaccggatg
901 cgcgaccgct acgacgcctt ctgcttcacc tccgcgctgg cgggccaagt gttcttcgtg
961 cccgggcggc tgacgctgtc tgaagcccac gcggcgtgcc ggcgacgcgg cgccgtggtg
1021 gccaaggttg ggcacctcta cgccgcctgg aagttttcgg ggctagacca gtgcgacggc
1081 ggctggctgg ctgacggcag tgtgcgcttc ccaatcacca cgccgaggcc gcgctgcggg
1141 gggctcccgg atcccggagt gcgcagtttc ggcttcccca ggccccaaca ggcagcctat
1201 gggacctact gctacgccga gaattaggcg cccaccgtgt cccctccagc gcgcgcgaag
1261 aagcttggga gtcgtggcgg gggtctctcg ccaccccttt ccggagagcc tcccctccct
1321 ccagacccgg agcggcctct ccagacctgc cttcccagcc gggggctgcg ggcctcggac
1381 cccggctggc ccggcggcgg ggaggggagg cgggggcgcc tccggcggcg agatgcagag
1441 gtgaccctcg gacccgctgc cgttcgcgaa ccctagcaga ggactcagcc accgccgggg
1501 ggagggtgag gcggccgggg gcattaactg acctctgagt acagcaataa aataacctgg
1561 ggatcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa
//