LOCUS BC029828 1976 bp mRNA linear HUM 19-JAN-2006 DEFINITION Homo sapiens beta-1,4-N-acetyl-galactosaminyl transferase 1, mRNA (cDNA clone MGC:34476 IMAGE:5176204), complete cds. ACCESSION BC029828 VERSION BC029828.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1976) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1976) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 51 Row: m Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4809289. FEATURES Location/Qualifiers source 1..1976 /db_xref="H-InvDB:HIT000040891" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34476 IMAGE:5176204" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1976 /gene="B4GALNT1" /gene_synonym="GALNACT" /db_xref="GeneID:2583" /db_xref="HGNC:HGNC:4117" /db_xref="IMGT/GENE-DB:4117" /db_xref="MIM:601873" CDS 433..1419 /gene="B4GALNT1" /gene_synonym="GALNACT" /codon_start=1 /product="B4GALNT1 protein" /protein_id="AAH29828.1" /db_xref="GeneID:2583" /db_xref="HGNC:HGNC:4117" /db_xref="IMGT/GENE-DB:4117" /db_xref="MIM:601873" /translation="MWLGRRALCALVLLLACASLGLLYASTRDAPGLRLPLAPWAPPQ SPRRPELPDLAPEPRYAHIPVRIKEQVVGLLAWNNCSCESSGGGLPLPFQKQVRAIDL TKAFDPAELRAASATREQEFQAFLSRSQSPADQLLIAPANSPLQYPLQGVEVQPLRSI LVPGLSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNR QLQLVTYSSRSYQTNTADTGARPGWRDGQAGQTEKNQKGWSGQMAEGMGGIWAMARAV QPHNGCFNWTSRARGRKGAFVHLGLEQARGKPEPWVCLPFRPTVGGPRKRLV" BASE COUNT 417 a 592 c 551 g 416 t ORIGIN 1 cgcattcccc gcgcggagcc gaagcagccg caacgagccg ggagctgagc cgcgctgcgc 61 tgcggtgcga agagccgggc ggcggccaga gccctccccg cgctgccagt gggacgcgga 121 gccagggatc cccggctttg ccccggggct ggggtgcaac agactcttaa cttggtcctc 181 gcgccccgcc aaccgccccc gggcaggaaa cgcccagaac caccaccgcg ccgcgctcca 241 caaaagcccc gggagttcca agacgggagg gatcgggcgc gctccagagg caggagggtc 301 ccccacaccc tcaggctcat gcccagctcc cccatcgggc agcccccagc cccatgagga 361 ccctcaggcc ggggcgagag cccggcacag cccggaccga aattttgccg ctgccttaga 421 gcgttagaca ggatgtggct gggccgccgg gccctgtgcg ctctggtcct tctgctcgcc 481 tgcgcctcgc tggggctcct gtacgcgagc acccgggacg cgcccggcct ccggctacct 541 cttgcgccgt gggcgccccc gcaaagcccc cgcaggcccg agctgccaga tcttgctcct 601 gagccccgct acgcacacat cccggtcagg atcaaggagc aagtagtggg gctgctggct 661 tggaacaact gcagttgtga gtccagtggg gggggcctcc ccctcccctt ccagaaacaa 721 gtccgggcta ttgacctcac caaggccttt gaccctgcag agctgagggc tgcctctgcc 781 acaagagagc aggagttcca ggcctttctg tcgaggagcc agtccccagc tgaccagctg 841 ctcatagccc ctgccaactc cccgctccag taccccctac agggtgtgga agttcagccc 901 ctcaggagca tcttggtgcc agggctgagc cttcaggcag cttctggtca ggaggtatac 961 caggtgaacc tgactgcctc cctaggcacc tgggacgtgg caggggaagt gactggagtt 1021 actctcactg gagagggtca ggcagatctc acccttgtca gcccagggct ggaccaactc 1081 aacaggcaac tacaactggt cacttacagc agccgaagct accagaccaa cacagcagac 1141 acaggtgcaa ggcctgggtg gagagacggg caggctgggc aaacagagaa gaaccagaaa 1201 ggctggagtg ggcaaatggc agagggcatg ggaggcatct gggctatggc cagagctgtc 1261 cagccacaca atgggtgctt caactggacc agcagggcca gagggagaaa gggggccttt 1321 gttcatctgg ggctggagca ggccagaggg aaacccgagc cttgggtgtg tctccccttt 1381 aggccaactg tggggggccc caggaagaga cttgtctaag gagttagaag actatattcc 1441 caacccaccc cttactagag ggcaaaggtc tttactttcc tgagatccca tttctcttcc 1501 agcaaaagag gcctaaaagc cctctttgct tctccccaaa gctggtttgt tgcactaagt 1561 ttgcttccac cttagggcct ttgcactttc tattttctca gcctggaatg ctcttcccca 1621 gatttttgca gactggcttc ttcttgtcat ttagatctca gttcaaatgc ctcctcttca 1681 ctatcacatt acttgtttgt cttattttcc actcaatact taccagtatc tgaatttttt 1741 aatttactta gcctggcacc agactgacta ggttgctatc agttttgttg cttaatagtt 1801 gtgtaaatgt ggcaagttac ttttctgtgt ctcagctttt ttttctgttg taggaatcta 1861 cttaataggg ctatcatggg gataaaatga gtgcatatat ttaaggtaat tttttaacgg 1921 gtctggcaca tagtaagtgc tcaataaaga ttagctttta cttaaaaaaa aaaaaa //