LOCUS BC029783 1519 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens signal transducer and activator of transcription 3 (acute-phase response factor), mRNA (cDNA clone IMAGE:5193339), with apparent retained intron. ACCESSION BC029783 VERSION BC029783.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1519) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1519) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 50 Row: l Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47458819 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1519 /db_xref="H-InvDB:HIT000091899" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5193339" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 361 a 353 c 443 g 362 t ORIGIN 1 cccaaccgga tcctggacag gcaccccggc ttggcgctgt ctctccccct cggctcggag 61 aggcccttcg gcctgaggga gcctcgccgc ccgtccccgg cacacgcgca gccccggcct 121 ctcggcctct gccggagaaa caggtgaagg gggtgcaggg tggggccgtt ggggaggcct 181 ggggacccgg gggctccgca gcggcagggg gcctctggga ccttggggat gttgtgatgg 241 acgctgcagt ggggccggga gagatgaaga gacgcggagg gtcgccctga gggaagactc 301 ttcgggatga caggagcggg cctcggaagg gactcggggc gctggaggga agtttcgttc 361 ttcggagaaa cagaacgcgc tcgagggggc accgtggggc gagggcgcac tcggttgcgg 421 cggcaggagt gagggacagt cccccgattt cctgctccct ggggccctgg ggacgttccg 481 gccaccggag cgactgtcac gccgacgggg atcaccggcg cgagtggggg gtcggaaagc 541 gcctcctccc cgcccggtcg gcggctcccg ctgagccact tcctccgctt gccctgttcc 601 cgctccttca ggagacagct gtgccctttt ggaggcagga ataggtgtgt ctgtcgcctg 661 cagccttacg ggctggctgg tcgtgggtag gctttattgc ataagaatca agtttcctgt 721 agggaaattg acagaccggt actctttcta aattccctcg catctttttc taggttaaat 781 tatgctcccc ccacgtcccc gccttgtaaa aaagagaaaa aaagacaaaa taaaatcccc 841 atcaacccgt caagccagct ctagagagag aaataaacct cttgacattg tccttttcca 901 aatacctggt aaagtcggcc agaagataaa taattgagcc attgcattta ctggattgtg 961 gtgttgctta attgcatagg acggaatgaa ccaattgaga gtgggagttt tctgtctcag 1021 agccaagatc ttgggtaaat gcagaggaga gggaaacaaa gacaggctgg ccttgaaaaa 1081 accatgtgtg caaactttac atgcatttgg ggggtgtggt tgcactgaag ttaacaagat 1141 tcaaaccgtc gcccaagttg gtatttccat gtttggtaca catcactctg tgccatatca 1201 ggtcgttgtt aagtgtggtg acaaaatcag tggttagtca tttttttaat taaaaatgtg 1261 tatagtgtgt acctgctggt cttactgtat gtgcaactaa aggtttacat agtctgtgta 1321 tgggttgtaa atttttggct ggctgtgctg ataaagcatt gggcttgaat aaagcaaagc 1381 agaaaatcat ctcaatcttt tatatgtgga tttagactgt gttatgactt ggttcagcca 1441 gttttctatc ttattttata ttaaatatgt ctgtgttctc tgaaaaaaaa aaaaaaaaaa 1501 aaaaaaaaaa aaaaaaaaa //