LOCUS BC029770 2899 bp mRNA linear HUM 09-MAR-2007 DEFINITION Homo sapiens low density lipoprotein receptor adaptor protein 1, mRNA (cDNA clone MGC:34705 IMAGE:5197824), complete cds. ACCESSION BC029770 VERSION BC029770.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2899) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2899) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 50 Row: o Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22027529. FEATURES Location/Qualifiers source 1..2899 /db_xref="H-InvDB:HIT000040867" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34705 IMAGE:5197824" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2899 /gene="LDLRAP1" /gene_synonym="ARH" /gene_synonym="ARH1" /gene_synonym="ARH2" /gene_synonym="DKFZp586D0624" /gene_synonym="FHCB1" /gene_synonym="FHCB2" /db_xref="GeneID:26119" /db_xref="HGNC:HGNC:18640" /db_xref="MIM:605747" CDS 25..951 /gene="LDLRAP1" /gene_synonym="ARH" /gene_synonym="ARH1" /gene_synonym="ARH2" /gene_synonym="DKFZp586D0624" /gene_synonym="FHCB1" /gene_synonym="FHCB2" /codon_start=1 /product="low density lipoprotein receptor adaptor protein 1" /protein_id="AAH29770.2" /db_xref="GeneID:26119" /db_xref="HGNC:HGNC:18640" /db_xref="MIM:605747" /translation="MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLE GMLFSLKYLGMTLVEQPKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDN LTNQLIENVSIYRISYCTADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLT VAQAFKVAFEFWQVSKEEKEKRDKASQEGGDVLGARQDCTPPLKSLVATGNLLDLEET AKAPLSTVSANTTNMDEVPRPQALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGL TAQDMHYAQCLSPVDWDKPDSSGTEQDDLFSF" BASE COUNT 645 a 839 c 789 g 626 t ORIGIN 1 cggcggcggc ggccggagcg ggccatggac gcgctcaagt cggcggggcg ggcgctgatc 61 cggagcccca gcttggccaa gcagagctgg gggggcggtg gccggcaccg caagctgcct 121 gagaactgga cagacacgcg ggagacgctg ctggagggga tgctgttcag cctcaagtac 181 ctgggcatga cgctagtgga gcagcccaag ggtgaggagc tgtcggccgc cgccatcaag 241 aggatcgtgg ctacagctaa ggccagtggg aagaagctgc agaaggtgac tctgaaggtg 301 tcgccacggg gaattatcct gacagacaac ctcaccaacc agctcattga gaacgtgtcc 361 atatacagga tctcctattg cacagcagac aagatgcacg acaaggtgtt tgcatacatc 421 gcccagagcc agcacaacca gagcctcgag tgccacgcct tcctctgcac caagcggaag 481 atggcacagg ctgttaccct caccgtagcc caggccttca aagtcgcctt tgagttttgg 541 caggtgtcca aggaagagaa agagaagagg gacaaagcca gccaagaggg aggggacgtc 601 ctgggggccc gccaagactg cacccccccc ttgaagagct tggtcgccac tgggaacctg 661 ctggacttag aggagacggc taaggccccg ctgtccacgg tcagcgccaa caccaccaac 721 atggacgagg tgccgcggcc acaagccttg agtggcagca gtgttgtctg ggagctggat 781 gatggcctgg atgaagcgtt ttcgaggctt gcccagtctc ggacaaaccc tcaggtcctg 841 gacactggcc tgacagccca ggacatgcat tacgcccagt gcctctcgcc tgtcgactgg 901 gacaagcctg acagcagcgg cacagagcag gatgacctct tcagcttctg agggcccggg 961 gccagccgga cacaagcggc cctgacacgt gatggaccaa agccacctgc tgcgggggag 1021 ccagttctgg ggcccgcctg ccacctctcc cagccctcag cattgtcagc ctgaagatca 1081 gagctgcagc cagtcaggca ggggagagat ttttctttta agccctgctc tttctctgag 1141 aaccaaaaga tgccttgaat atttattcag tgacttctgg cttatgctca gaagccagtc 1201 tgcgtcaggc acgtctcctg ctgcgtgaca tgtgcagtgc tgtaatcggc tcccgcttgc 1261 tctcctggag caagctctgc cctggctgtg ggtatcagga ctgtgaccaa agcatttcta 1321 gtcccttctc tctttctaag gacccaaatt tccctggggg catcctgctt cctgaaagct 1381 gttggatttc agtgattttt ccccccaccc cccagcacag gagagcaccc acagccgcag 1441 aaggggaatg tgtcctcctg ctctgcttcc tcagggccca gcaggcgggg gtttgagccc 1501 tggaccccag gctcttagag actaaggggc agctcctgac caaagacgat acagcttggc 1561 actttaaagc attaacagca ggtgtgaccc tgagggctcc tccatggtgc tgcattgagt 1621 ccagctttcc ttctgccctt cctccaggag aaggggccca aggtccccgt ggatggtctc 1681 cacctgtgct tggaaccagt gtaactggct gctccctgct cccagggact gacacgggga 1741 tcatctctgt gaccgccctc cgtcgggccc ctgcctgcct tctcccctcc acgcaaggct 1801 gtgctcttcc tctggtttct gtgtgtccgt ttgagtgtct gcgccccgcc tccccatact 1861 tcctgggatg atgtgtgaaa cctgacacct agatttattt ggaaatattc tatgaccact 1921 ttacagatga ggaaactgag gcctcaagcg tggaggggta gagtgaagag tagaacccag 1981 gtctgatgcc aaagctgctt tcttctctgc ctcctcctca cgcaactcac acctcctttt 2041 cttctagctt tgttgtcctc ccaggaacca aaaaacccca gctattttct gaccaaaatg 2101 tgtttcataa caaaccatct ggtgcctttc cacacagaac tggcaggagc ctcgtgtcct 2161 gctagctgtc tctcttgttg atttccgtga aaatgcaagt gtttgaagtc tgctcattcc 2221 gagggtgaaa caaaatccaa ccctgtcaga atcatgctgt tctctttgct gacactgtga 2281 ccctgggtcg ggacagacca gcagcaatct gtctttagaa tcgctttcct tcctcccctt 2341 ttgcccccgt ggggctcccg gcatcctgaa agccagcaaa gcctccagca tcttttccat 2401 cctgaggtgc ctcccagtgg cctggcttgt cggagcaagt ttcatcagcc ctagggaaaa 2461 cacggccctc ctgggaacct ccttacctgg agtaaccgga caccttagac ggaggtgcct 2521 gagggtgggg tgggatttgc agggtcatta tcagaacatg aggataactt ccttgcccct 2581 gctctgtagc cacctccttg gcaccggcct ctatttgtca taaggcggcg tgggcgaggc 2641 ctgacacagg ccagccttgg cacgaggggg gccaggggtt ctgagaagcg ctgccctgtg 2701 agagccacgc tggccttcgt ctccatctct ggttgacggg ctgtccgtgt gcctcctgtg 2761 tgtctgcaga caagtcttgc tgtgctttat ttgtgaaact ttaatgagga aaaaacaaat 2821 aataaatgtt ctcgttttga aactcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2881 aaaaaaaaaa aaaaaaaaa //