LOCUS BC029760 3166 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens OTU domain containing 6B, mRNA (cDNA clone MGC:16950
IMAGE:4343258), complete cds.
ACCESSION BC029760
VERSION BC029760.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3166)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3166)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254878.
FEATURES Location/Qualifiers
source 1..3166
/db_xref="H-InvDB:HIT000040866"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16950 IMAGE:4343258"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3166
/gene="OTUD6B"
/gene_synonym="CGI-77"
/db_xref="GeneID:51633"
/db_xref="HGNC:HGNC:24281"
CDS 36..917
/gene="OTUD6B"
/gene_synonym="CGI-77"
/codon_start=1
/product="OTU domain containing 6B"
/protein_id="AAH29760.1"
/db_xref="GeneID:51633"
/db_xref="HGNC:HGNC:24281"
/translation="MEAVLTEELDEEEQLLRRHRKEKKELQAKIQGMKNAVPKNDKKR
RKQLTEDVAKLEKEMEQKHREELEQLKLTTKENKIDSVAVNISNLVLENQPPRISKAQ
KRREKKAALEKEREERIAEAEIENLTGARHMESEKLAQILAARQLEIKQIPSDGHCMY
KAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEFQKYCED
IVNTAAWGGQLELRALSHILQTPIEIIQADSPPIIVGEEYSKKPLILVYMRHAYGLGE
HYNSVTRLVNIVTENCS"
BASE COUNT 1065 a 460 c 577 g 1064 t
ORIGIN
1 ttcttctagc gcgtgtgctg gggtacctgg tcgtcatgga ggcggtattg accgaagagc
61 ttgatgagga agagcagctg ctgagaaggc atcgcaaaga gaagaaggag ttgcaagcca
121 aaattcaggg catgaagaat gctgttccca agaatgacaa gaagaggagg aagcagctca
181 ccgaagatgt ggccaagttg gaaaaagaaa tggaacagaa acatagagag gaactggagc
241 aattgaagct gactactaag gagaataaga tagattctgt tgctgttaac atttcaaact
301 tggtgcttga gaatcagcca cctcggatat caaaagcaca aaagagacgg gaaaagaaag
361 ctgcattgga aaaggagcga gaagaacgga tagctgaagc tgaaattgaa aacttaacag
421 gagccagaca tatggaaagt gagaaacttg ctcaaatatt ggcagctaga cagttagaaa
481 ttaaacagat tccatctgat ggccactgta tgtataaagc cattgaagat caactgaaag
541 aaaaggattg tgctctgact gtggttgcct tgagaagtca gaccgctgag tatatgcaaa
601 gccatgtgga agactttctg ccatttttaa caaaccctaa tacaggagat atgtatactc
661 cagaagaatt tcagaagtac tgtgaagata ttgtaaacac agctgcatgg ggaggtcagc
721 ttgagctaag agctctgtct cacattttac aaacaccaat agagataata caggcagatt
781 ctcctcccat tatagttggt gaagaatatt caaaaaaacc actaatactt gtatatatga
841 gacatgcata tggcttagga gaacattata attcggttac acggttggta aacatagtta
901 ctgaaaattg cagctaattt atacaatgtt gtacaattat gttttaatac agtgtgctga
961 actgagtatt tctaccaagt gttgggttgt tctaaatgct actgaaaaac acaactacct
1021 tatatcagtt ttatggcaaa gctactaaca ggtgttttta gaaatatgtc agagataaac
1081 tttaaccagt gtcttcttag tggaatttta aaaatttgtt aagttcattg tagagaacac
1141 cattcataga ccaagatggt cccctattag ctgatatttt catttatgta agatcctgga
1201 cattctgttt tgtgttggaa caaattttca atgtttttaa ttctcccttt tctgcctgtt
1261 cctaaaaact ttcaaaataa ccatttcaat gtaatttgtc ttgaagaagt ttacccaata
1321 tctttgtcat tgcaataatg tagtatggtg atggtcaatt taattattgc ttataaaatg
1381 aacttgattg cagtaaccat ggtatcgatg agactaatgc agtgaagctt tattactaat
1441 atatatagcc ttatcaaagc aagctaagaa gcttgcttta ataattaata atttaaaaat
1501 atttatttag atgggattca gttgtttaaa gaagtgagat aaattcaaag gtaaataggt
1561 attctctgtc aaatttaaat ctctaaagaa ttagagatta gttttttatt tgtgtataat
1621 ttaaaaaaga cctaataggt tactgtcttt ttaatgcatt tgttattctt tcgtattttt
1681 taagcatcgg actggagtta gtaccatcat ctcttgagtc tttcataact acacattttt
1741 atatttcctt ttgtgttttc tactttgctt tccttgaagg aacaagcatt ttgtggcctt
1801 taccttgtgc aattttaggg agtagcagtg taaaaggtcc aagaccacat ttacttgaaa
1861 ttcttcctct tttctgattt gtcttaccag atatttccct tcttgcctca ttctctagga
1921 tttgaataaa acctttgcca cttattttat tagccttatt aatgtcacct ttccttcaac
1981 tcaaatattt gagaaatttt atgttacata tatgaatgaa gttgaaagct actgtttgga
2041 agctaagact tgtatagagt agttttgtat atgaatggtt gttctagctc agatttcagg
2101 ttactcacaa cagtattctt tctaagagga tatatacaaa tgtctctcat aatttatgta
2161 aggaaatatt atgaaaatga gactttttta gtttgatgtg tgtttcccaa actagagata
2221 aaactagtaa gatttagtat cgtttataac atttgaattt ttgctccatg agtacaacta
2281 atttttataa gtaaatattg ggtttatatg aaaaatgggg tgtcagtctt ttcacacgcc
2341 cagcaggtaa caatgtggga agctggcagg gtcattgata gcaagtaagt acttcctgaa
2401 ggctttccag ttcaaaagat tacaagccat tctgcctgcc aaacaaatta tattctgaag
2461 atgcctgttt tgtaaccctt gatgtgaatt ttttggtgtc tgaaatttac aaaagaatga
2521 aattgaaatt gtaaaacact aaatgctttg ggtttatttt gaagtaatct gttactttaa
2581 aatgtcaaca ttaggaagcc ataaaacaag atattatgaa acccagtatt ataaatgtta
2641 tctacatcta aagtatttta aaataactta ttggcatctt tattcttttt ttccttacaa
2701 gatttagaat ctttttggtt atatgtctat ttttcaattt tgttatattt ttaatttaag
2761 tggccaatgt ggttatgaac aagatttgta tggtcagctt ctgttctttc ctaaaacttc
2821 agataaatat cattttagct ataacctaaa aaagtgttta aataaaatga cagatgttaa
2881 tttaaaagca gcatatgcta atttactttt tcatatgatg atggtctaat ggaagttaca
2941 tatgctttct tttgtcctaa ctctgaaaag tatatgtcag agttctggaa tatgtcttta
3001 gccaagaatt ttattcactt aaatttgttt acaacttgta taaagcaaaa aagaatgtgt
3061 gtaactatag tgaacgcata gttttgctta tattatgtga tgtttgccaa aaaaagaata
3121 aaaaatgaat gaattaaatc aaaaaaaaaa aaaaaaaaaa aaaaaa
//