LOCUS BC029687 3664 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), mRNA (cDNA clone MGC:29835 IMAGE:5001181), complete cds. ACCESSION BC029687 VERSION BC029687.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3664) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3664) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 42 Row: l Column: 8. FEATURES Location/Qualifiers source 1..3664 /db_xref="H-InvDB:HIT000040859" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29835 IMAGE:5001181" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3664 /gene="DCLRE1B" /gene_synonym="FLJ12810" /gene_synonym="FLJ13998" /gene_synonym="SNM1B" /db_xref="GeneID:64858" /db_xref="HGNC:HGNC:17641" /db_xref="MIM:609683" CDS 172..1770 /gene="DCLRE1B" /gene_synonym="FLJ12810" /gene_synonym="FLJ13998" /gene_synonym="SNM1B" /codon_start=1 /product="DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae)" /protein_id="AAH29687.1" /db_xref="GeneID:64858" /db_xref="HGNC:HGNC:17641" /db_xref="MIM:609683" /translation="MNGVLIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTW ARPLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPG SVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQE AAHQIVQLIRKHPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLAD VFTVEEKAGRIHAVDHMEICHSNMLRWNQTHPTIAILPTSRKIHSSHPDIHVIPYSDH SSYSELRAFVAALKPCQVVPIVSRRPCGGFQDSLSPRISVPLIPDSVQQYMSSSSRKP SLLWLLERRLKRPRTQGVVFESPEESADQSQADRDSKKAKKEKLSPWPADLEKQPSHH PLRIKKQLFPDLYSKEWNKAVPFCESQKRVTMLTAPLGFSVHLRSTDEEFISQKTREE IGLGSPLVPMGDDDGGPEATGNQSAWMGHGSPLSHSSKGTPLLATEFRGLALKYLLTP VNFFQAGYSSRRFDQQVEKYHKPC" BASE COUNT 953 a 873 c 825 g 1013 t ORIGIN 1 cctttttctg cccactctgg taacttattg ctctgctggg ctctttccct tagggtctct 61 ggccctgttc ttgccccagc atgactttta tcgggacgcc gttgtggaag cctcacgcag 121 gagccctgcc cccgtggaga agatcccact ggtgactcca accctaccac catgaatggg 181 gtcctgatcc cccatacgcc catcgcagtg gacttctgga gcctgcgccg ggctggcacc 241 gcacgtctct tcttcttgtc tcacatgcac tcggaccaca ccgtgggcct gtctagcacc 301 tgggcccggc ccctctactg ctccccaatt acagcccacc tcttgcatcg tcacctacag 361 gtatctaagc aatggatcca agccctggag gttggtgaga gccatgtatt acccctagat 421 gaaattggac aagagaccat gaccgtaacc ctcctcgatg ccaatcactg tcctggttct 481 gtcatgtttc tctttgaagg atattttgga accatcctct acacaggtga ttttcgatac 541 acaccatcca tgctaaagga gccagccctg acactgggga aacagatcca tactttatac 601 ctagacaaca ccaattgcaa tccagccctg gttcttcctt cccgacaaga agctgcccac 661 cagattgtcc agctcattcg aaaacaccca caacataaca taaagattgg actctacagc 721 ctgggaaagg aatcactgct ggagcagctg gccctggagt ttcagacctg ggtggtattg 781 agtcctcggc gcctggagtt ggtacagcta ctgggcctgg cagatgtgtt cacagtggag 841 gagaaggctg gccgcatcca tgcagtagac catatggaga tctgccattc caacatgctg 901 cgttggaacc agacccaccc tacgattgct atccttccca caagccgaaa aatccacagc 961 tcccaccctg atatccacgt catcccttac tctgaccatt cctcttactc cgagcttcgt 1021 gcctttgtcg cagcactgaa gccttgccag gtggtgccca ttgtaagtcg gcggccctgt 1081 ggaggctttc aggacagtct gagccccagg atctccgtgc ccctgattcc ggactctgta 1141 cagcaataca tgagttcttc ctctagaaaa ccaagccttc tctggctgtt agaaaggagg 1201 ctaaagaggc cgagaaccca aggtgttgtg tttgaatccc ctgaggaaag tgctgatcaa 1261 tctcaagctg acagagactc aaagaaggcc aagaaagaga aactttctcc ctggcctgcg 1321 gaccttgaaa agcagccttc ccaccatcct ttgcggatca agaagcagtt gttcccagat 1381 ctctatagca aagaatggaa caaggcagtg cctttctgtg agtctcaaaa gagggtgact 1441 atgttgacgg ccccactggg attttcagtg cacttaaggt ctacagatga ggagtttatt 1501 tctcaaaaaa ccagggagga aattggttta gggtccccct tggtacccat gggagatgat 1561 gatggaggtc cagaagccac agggaatcag agtgcctgga tgggccatgg ttctcccctg 1621 tcccacagca gcaagggcac ccctcttcta gctactgaat tcaggggtct agcactcaaa 1681 tatcttctga ctccagtgaa ctttttccag gcagggtatt cttccaggag atttgaccag 1741 caagtggaaa aataccataa accctgctga agacaggaga gtacagaatg acaacattga 1801 gcccacactg cagttttgaa gatagtaact gatggctggt gggaaagagt ttgtttttgg 1861 ggcctacttt tctatcttta caagactctt atgggcccac cgtggagcag cacttcccaa 1921 aacttgttca ctggggtcct cgtgcctatg gaatccttct ttttataact aagtttaaga 1981 aatacttttt ttataaaatc tttggagtat gcgtgagcaa attaaaagtt ctttgaagtc 2041 ctacagtaac ttaatctgtt taaccttgtt taacccagta tttctcaaac ttttgtgaac 2101 atgcaatcat cttatgtggg tacagaaaga ggtaaagagt ctgaatcaaa aaggaccagg 2161 ttattgctgt tgctgttttg tggtgtcatg agccattctc catgtcccct tctccctctt 2221 ctcagatcaa aatccctagg gagttctatt tttaaaatta tgaactatgg cgctgcatgc 2281 ttcaatcctg aacgtcactg acttgctgtg accatccaaa taattttcct gtctctgcct 2341 ctgggaggga acaggaagcg atgaagaggt cttggaacag tagtgaaaat tctacctcta 2401 tgtccttcat gaggatgtgc agtatcccag tatcactggg atccatgtgg aacagagcca 2461 gctggggggt tgggcagctc tctccaaggc agtacctaga gcccagctga acaacaaggc 2521 tttgggtgtg aagggactcc ccagcctgga gaccctattt ggctgaaaca gttacaaaat 2581 atcaaatgtg ttgtcagata ttcctccaat tgttcacata gctgggatat ttgttgctcc 2641 cctcacccct tggattatgt agggagccag tgcacacagc ctgtttgttt tagtatccaa 2701 ggaagagacc aaggagccag ctggcgggaa ggggtggggg tgtgcagtct gccctgtcct 2761 tctgctcata acctgacaaa atgccaaact agtaagcagg atagctgata ccacggctat 2821 gagggagtag gctctgagag ggcacagact tgtggagctg ggcgtctgga tcaaaactgc 2881 tttgggatgg aacctcgagc cctagcagtg aagaagattc catttcttgt ccaggggatt 2941 taaaagagtt ttctgctttg agagagaaat agagagttta gaaagcaatt gctcttggga 3001 aagctataca cagctctgtt ttgtcaatga cctttgttgt aagtctccca acgtcctatt 3061 aggagccaca gcaggtgagg catttggtgc agcaggaaac atggggactg cctaggctcg 3121 aatctgtggc accctgagca attacttaaa ttgtggagcc tagttcctca tctgtaagat 3181 ggacttgaga ttcctacctc tcatgattac tatggagatt gaataattgg taaaattctc 3241 ctagctcagt gactgccaca ggatgggtct ttcagatttt ggttctcttt agcttctggt 3301 tcttgaaaga aattaatctg tatataacat aagaaacttt gaaagtcaaa aaaacaaaaa 3361 attttaattc ctcgtagatt aattgatttg ctatctttta gttttttttt ctatgcatgt 3421 agatgtatta aatatgtaaa tgtttttcaa agttgaggta atattgtata gaattttata 3481 gcctacattt taatttcttg atatcttaag catttcactt attagatatt gttcaaaaat 3541 gccattttta atatttgtat aataccctat catgtgagta taccttaact aagccattcc 3601 catattcaac attttgtgta ctgtttttct aattacatat attacaatga aaaaaaaaaa 3661 aaaa //