LOCUS BC029617 2445 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens prolyl 4-hydroxylase, beta polypeptide, mRNA (cDNA
clone MGC:9695 IMAGE:3848651), complete cds.
ACCESSION BC029617
VERSION BC029617.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2445)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2445)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: j Column: 4.
FEATURES Location/Qualifiers
source 1..2445
/db_xref="H-InvDB:HIT000040847"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9695 IMAGE:3848651"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2445
/gene="P4HB"
/gene_synonym="DSI"
/gene_synonym="GIT"
/gene_synonym="P4Hbeta"
/gene_synonym="PDI"
/gene_synonym="PDIA1"
/gene_synonym="PHDB"
/gene_synonym="PO4HB"
/gene_synonym="PROHB"
/db_xref="GeneID:5034"
/db_xref="HGNC:HGNC:8548"
/db_xref="MIM:176790"
CDS 45..1571
/gene="P4HB"
/gene_synonym="DSI"
/gene_synonym="GIT"
/gene_synonym="P4Hbeta"
/gene_synonym="PDI"
/gene_synonym="PDIA1"
/gene_synonym="PHDB"
/gene_synonym="PO4HB"
/gene_synonym="PROHB"
/codon_start=1
/product="prolyl 4-hydroxylase, beta polypeptide"
/protein_id="AAH29617.1"
/db_xref="GeneID:5034"
/db_xref="HGNC:HGNC:8548"
/db_xref="MIM:176790"
/translation="MLRRALLCLAVAALVRADAPEEEDHVLVLRKSNFAEALAAHKYL
LVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI
KFFRNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGF
FKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEG
EVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFK
TAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEEL
TAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEF
YAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASA
DRTVIDYNGERTLDGFKKFLESGGQDGAGDDDDLEDLEEAEEPDMEEDDDQKAVKDEL
"
BASE COUNT 563 a 682 c 702 g 498 t
ORIGIN
1 cccggcggcg ccaaccgaag cgccccgcct gatccgtgtc cgacatgctg cgccgcgctc
61 tgctgtgcct ggccgtggcc gccctggtgc gcgccgacgc ccccgaggag gaggaccacg
121 tcctggtgct gcggaaaagc aacttcgcgg aggcgctggc ggcccacaag tacctgctgg
181 tggagttcta tgccccttgg tgtggccact gcaaggctct ggcccctgag tatgccaaag
241 ccgctgggaa gctgaaggca gaaggttccg agatcaggtt ggccaaggtg gacgccacgg
301 aggagtctga cctggcccag cagtacggcg tgcgcggcta tcccaccatc aagttcttca
361 ggaatggaga cacggcttcc cccaaggaat atacagctgg cagagaggct gatgacatcg
421 tgaactggct gaagaagcgc acgggcccgg ctgccaccac cctgcctgac ggcgcagctg
481 cagagtcctt ggtggagtcc agcgaggtgg ctgtcatcgg cttcttcaag gacgtggagt
541 cggactctgc caagcagttt ttgcaggcag cagaggccat cgatgacata ccatttggga
601 tcacttccaa cagtgacgtg ttctccaaat accagctcga caaagatggg gttgtcctct
661 ttaagaagtt tgatgaaggc cggaacaact ttgaagggga ggtcaccaag gagaacctgc
721 tggactttat caaacacaac cagctgcccc ttgtcatcga gttcaccgag cagacagccc
781 cgaagatttt tggaggtgaa atcaagactc acatcctgct gttcttgccc aagagtgtgt
841 ctgactatga cggcaaactg agcaacttca aaacagcagc cgagagcttc aagggcaaga
901 tcctgttcat cttcatcgac agcgaccaca ccgacaacca gcgcatcctc gagttctttg
961 gcctgaagaa ggaagagtgc ccggccgtgc gcctcatcac cctggaggag gagatgacca
1021 agtacaagcc cgaatcggag gagctgacgg cagagaggat cacagagttc tgccaccgct
1081 tcctggaggg caaaatcaag ccccacctga tgagccagga gctgccggag gactgggaca
1141 agcagcctgt caaggtgctt gttgggaaga actttgaaga cgtggctttt gatgagaaaa
1201 aaaacgtctt tgtggagttc tatgccccat ggtgtggtca ctgcaaacag ttggctccca
1261 tttgggataa actgggagag acgtacaagg accatgagaa catcgtcatc gccaagatgg
1321 actcgactgc caacgaggtg gaggccgtca aagtgcacag cttccccaca ctcaagttct
1381 ttcctgccag tgccgacagg acggtcattg attacaacgg ggaacgcacg ctggatggtt
1441 ttaagaaatt cctggagagc ggtggccagg atggggcagg ggatgatgac gatctcgagg
1501 acctggaaga agcagaggag ccagacatgg aggaagacga tgatcagaaa gctgtgaaag
1561 atgaactgta atacgcaaag ccagacccgg gcgctgccga gacccctcgg gggctgcaca
1621 cccagcagca gcgcacgcct ccgaagcctg cggcctcgct tgaaggaggg cgtcgccgga
1681 aacccaggga acctctctga agtgacacct cacccctaca caccgtccgt tcacccccgt
1741 ctcttccttc tgcttttcgg tttttggaaa gggatccatc tccaggcagc ccaccctggt
1801 ggggcttgtt tcctgaaacc atgatgtact ttttcataca tgagtctgtc cagagtgctt
1861 gctaccgtgt tcggagtctc gctgcctccc tcccgcggga ggtttctcct ctttttgaaa
1921 attccgtctg tgggattttt agacattttt cgacatcagg gtatttgttc caccttggcc
1981 aggcctcctc ggagaagctt gtcccccgtg tgggagggac ggagccggac tggacatggt
2041 cactcagtac cgcctgcagt gtcgccatga ctgatcatgg ctcttgcatt tttgggtaaa
2101 tggagacttc cggatcctgt cagggtgtcc cccatgcctg gaagaggagc tggtggctgc
2161 cagccctggg gcccggcaca ggcctgggcc ttccccttcc ctcaagccag ggctcctcct
2221 cctgtcgtgg gctcattgtg accactggcc tctctacagc acggcctgtg gcctgttcaa
2281 ggcagaacca cgacccttga ctcccgggtg gggaggtggc caaggatgct ggagctgaat
2341 cagacgctga cagttcttca ggcatttcta tttcacaatc gaattgaaca cattggccaa
2401 ataaagttga aattttacca ccaaaaaaaa aaaaaaaaaa aaaaa
//