LOCUS BC029611 1840 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 4, mRNA (cDNA clone MGC:39837 IMAGE:5304046),
complete cds.
ACCESSION BC029611
VERSION BC029611.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1840)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1840)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: p Column: 14.
FEATURES Location/Qualifiers
source 1..1840
/db_xref="H-InvDB:HIT000050981"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39837 IMAGE:5304046"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1840
/gene="ALS2CR4"
/gene_synonym="FLJ33282"
/db_xref="GeneID:65062"
/db_xref="HGNC:HGNC:14432"
CDS 67..1269
/gene="ALS2CR4"
/gene_synonym="FLJ33282"
/codon_start=1
/product="amyotrophic lateral sclerosis 2 (juvenile)
chromosome region, candidate 4"
/protein_id="AAH29611.1"
/db_xref="GeneID:65062"
/db_xref="HGNC:HGNC:14432"
/translation="MGKNPVRPPRAIPPVPSQDDIPLSRPKKKKPRTKNTPASASLEG
LAQTAGRRPSEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRN
ENGIDAEQAEEAVIQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQQSVFTA
PTGISQPVGKVFVEKSRRFQAADRSELIKTTENIDVSMDVKPSWTTIDVALTVHRAFR
MIGLFSHGFLAGCAVWNIVVIYVLAGDQLSNLSNILQQYKTLAYPFQSLLYLLLALST
ISAFDRIDFAKISVAIRNFLALDPTALASFLYFTALILSLSQQMTSDRIHLYTPSSVN
GSLWEAGIEEQILQPWIVVNLVVALLVGLSWLFLSYRPGMDLSEELMFSSEVEEYPDK
EKEIKASS"
BASE COUNT 577 a 343 c 390 g 530 t
ORIGIN
1 gaggggggag gggtggggcg ccaggtgctt gggggccggc ggccgccgag gccggctaaa
61 cgcagaatgg ggaagaatcc tgtgcgtcct ccacgagcta ttccacctgt gccaagtcaa
121 gatgatattc cacttagtcg tcctaagaaa aagaagccca gaacaaaaaa cacaccagca
181 agtgcttctt tggaaggcct tgctcagact gctggtcgaa ggccctctga gggcaatgag
241 ccatcaacta aagaactcaa agagcaccca gaggctcctg ttcaaagaag acagaaaaag
301 acaaggctac ctcttgaatt ggagacttcc tccacccaaa agaagtcatc tagttcatct
361 ttattacgaa atgaaaatgg tattgatgcg gagcaagctg aggaggcagt tattcaaaaa
421 cctcggagga agacaaagaa aacccagcca gcagaattac agtatgccaa tgagctagga
481 gtagaagatg aagacataat cactgatgag caaactactg tggaacagca gtctgtattc
541 actgcaccca ctggcattag ccagcctgta ggcaaagtat ttgtggaaaa aagccggaga
601 ttccaggctg ctgatcgttc agagttgata aagaccacag aaaacataga tgtgtcaatg
661 gacgtgaagc cttcctggac caccatagat gtggcactta cagtgcaccg ggctttcagg
721 atgattggtc tcttttctca tggattcttg gctggctgtg ctgtgtggaa tattgttgtg
781 atatatgttc tagcaggaga tcagctatcc aacctctcaa acattctgca acaatacaag
841 accctagcgt atccattcca gagtcttctg tacttgcttt tggctctgag tacaatttca
901 gcttttgaca ggattgactt tgctaaaata tcagtagcaa tccgaaattt tttggccctg
961 gatcctacag ctttagcatc tttcttgtac tttactgctc ttatactatc tctgagtcag
1021 caaatgacaa gtgacagaat ccacctttac acaccttctt ctgttaatgg tagcctctgg
1081 gaagcaggaa ttgaggaaca gattctccag ccatggattg tggtgaatct cgtggtggct
1141 cttctggttg gattatcttg gctatttttg tcttataggc caggcatgga tcttagtgaa
1201 gagttaatgt tctcctcaga ggtggaagaa tatcctgata aagagaaaga aatcaaagcc
1261 tcttcataat accagctcac ctttggagga ataatgaccc agtatttgtc ccatttttgt
1321 ttttaaatgt atttttataa gatgtataca tgtgtatttg taatagattt tttgattata
1381 taatactgaa acatctctca atattatgaa aaatgttaaa attgtgtttg ctgtttatgt
1441 ctaaacatta atttgtctag cattatcatc ttaatgacaa agggaataat gaactagaaa
1501 ccagcaagtg aaagtgttta tttcctattt tctcaaaaca gttgtattta taactattac
1561 cttaaaaagc actggtttag aaaaagccat aacttaaata gtgttataaa atatatatca
1621 ggtttaaaca taaatttagc gaatatggta gaagggaaaa aagccttcat ttttgacctc
1681 cccttactga ataaattgaa atatgaagtt tgtcttttct gaaactggct tagtgattga
1741 gtatcatgta ataattataa tataatttag cttgaaagat gctctacatt atgaccaata
1801 aaaagggaat gtatgttttg ttggaaaaaa aaaaaaaaaa
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