LOCUS BC029540 1300 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens cancer/testis antigen family 47, member A11, mRNA
(cDNA clone MGC:33984 IMAGE:5297051), complete cds.
ACCESSION BC029540
VERSION BC029540.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1300)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1300)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: l Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734834.
FEATURES Location/Qualifiers
source 1..1300
/db_xref="H-InvDB:HIT000040815_18"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33984 IMAGE:5297051"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1300
/gene="CT47A11"
/gene_synonym="CT47.11"
/db_xref="GeneID:255313"
/db_xref="HGNC:HGNC:27397"
CDS 260..1126
/gene="CT47A11"
/gene_synonym="CT47.11"
/codon_start=1
/product="cancer/testis antigen family 47, member A11"
/protein_id="AAH29540.1"
/db_xref="GeneID:255313"
/db_xref="HGNC:HGNC:27397"
/translation="MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD
VVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEA
ANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARN
PWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEE
KLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEK
DAENKVKNSKGT"
BASE COUNT 312 a 380 c 410 g 198 t
ORIGIN
1 gctgaccaga atctttccca acttgtctaa gtcctctcag gccagccttg gtgggaggtt
61 tctaggattc gctccctgcc cttcccatct tagggtgtcg tctgagacag actcttattc
121 cctcaataaa gagagagact cttattccct cagcggccag ctcctcgcct cccctcggcc
181 gtagccacct cagtggtcac cgtcttcacc gtggtcgcct cagcccgctc gccaccccag
241 ttgaggcgct gctggtgtca tgtctgccac aggggaccga cacccgaccc aaggggacca
301 ggaggccccg gtaagccagg agggagcaca ggccgaggcg gccggagctg gtaaccagga
361 gggcggcgac tccggccccg acagcagcga cgtggtgcct gcggccgagg tggtcggagt
421 cgcagggccc gtggaaggcc tcggggagga ggagggtgag caggcggcag gcctggccgc
481 agtcccccgg ggcgggagcg ccgaggagga ctcagatatc gggcccgcga cggaggaaga
541 ggaggaggaa gaggggaacg aggcggccaa cttcgacttg gcggtggtcg cccgtcgcta
601 cccggcgtcg ggcattcact tcgtgctcct ggacatggtc cactcccttc tccaccgcct
661 ctctcacaac gaccacatcc tcatagagaa ccgtcaactc agccgcctga tggtggggcc
721 acacgctgct gcgcgcaacc cctggggcaa cctccccccg ctgctgctgc cccagaggct
781 gggtgcaggg gccgcagccc gggcgggcga gggcctgggc ctgatccagg aggccgcatc
841 ggtcccagag cctgcagtgc cagctgacct ggccgagatg gccagggagc ccgcggagga
901 ggccgcagag gagaagctct cagaggaggc cacagaggaa ccagacgcag aggaaccggc
961 cacagaagaa ccgaccgcac aggaggccac ggccccagag gaagtcacta aatctcagcc
1021 cgaaaagtgg gatgaagagg cccaagatgc tgcaggcgag gaagagaaag aacaagaaaa
1081 agagaaggat gcggaaaaca aggtgaagaa ctccaaaggg acctagacgc agcagaggtg
1141 aagccaagaa aatccagatg cctgtgggaa ttgtaacaca tatcattcca aagttcgtta
1201 catcaaaagt gatatccagt gacatctaac tttcatggat gtatgtgaca gtgttcaagt
1261 taaaaaataa aagtttgttt taaatgaaaa aaaaaaaaaa
//