LOCUS BC029539 853 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens tetratricopeptide repeat domain 9B, mRNA (cDNA clone MGC:33962 IMAGE:5303555), complete cds. ACCESSION BC029539 VERSION BC029539.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 853) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 853) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: p Column: 23. FEATURES Location/Qualifiers source 1..853 /db_xref="H-InvDB:HIT000040814" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33962 IMAGE:5303555" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..853 /gene="TTC9B" /gene_synonym="FLJ30373" /gene_synonym="MGC33962" /db_xref="GeneID:148014" /db_xref="HGNC:HGNC:26395" CDS 11..730 /gene="TTC9B" /gene_synonym="FLJ30373" /gene_synonym="MGC33962" /codon_start=1 /product="tetratricopeptide repeat domain 9B" /protein_id="AAH29539.1" /db_xref="GeneID:148014" /db_xref="HGNC:HGNC:26395" /translation="MQRGALSPVLMLSAAPEPPPRPPPALSPPGSGPGSGSRHGSARP GPTPEPSGSLGAALDSSLRAAVAFKAEGQRCYREKKFREAIGKYHRALLQLKAAQGAR PSGLPAPAPGPTSSPGPARLSEEQRRLVESTEVECYDSLTACLLQSELVNYERVREYC LKVLEKQQGNFKATYRAGIAFYHLGDYARALRYLQEARSREPTDTNVLRYIQLTQLKM NRCSLQREDSGAGSQTRDVIG" BASE COUNT 159 a 299 c 263 g 132 t ORIGIN 1 gtttcccaca atgcagcgcg gcgcgctgtc cccggtgctg atgctcagcg ctgccccgga 61 gcctccgccg cgcccgcctc ccgccctctc cccaccgggc tcgggcccag gctcgggctc 121 ccgccatggc tcggctcgtc ccggtcctac cccagagccg tcggggagcc tgggcgcggc 181 gctcgacagc agcctgcgtg ccgccgtggc gttcaaggca gagggccagc gctgctatcg 241 agagaagaag ttccgggagg ccatcggcaa gtaccaccga gcgctgctgc agctgaaggc 301 ggcgcagggg gcccgcccta gcggcctgcc cgccccagcc cccgggccca ccagcagccc 361 cgggccggcg cgcctcagcg aggagcagcg gcgcctggtg gagagcacgg aggtggagtg 421 ttacgactcc ctcacggctt gcctgctgca gtcggagctg gtaaactacg agcgcgtgcg 481 cgagtactgt ctcaaggtac tggagaagca gcagggcaac ttcaaggcca cctaccgtgc 541 cggcattgcc ttctaccacc tgggcgacta cgcacgcgcg ctgcgctacc tgcaggaggc 601 ccgcagccgg gaacccacag acaccaatgt gctccgctac atccagctga ctcagctgaa 661 gatgaatcgt tgcagcctcc agcgggaaga cagtggggct gggtcccaga ctcgggatgt 721 aattggctga ggccaatcca gggggacctc tctatccctc gccctcccac ctcaccatgt 781 aacttccccc gactcatgtg tttgttggta aaacacttgt cactggtgat cataaagaaa 841 aaaaaaaaaa aaa //