LOCUS BC029525 1827 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens melanoma antigen family B, 18, mRNA (cDNA clone
MGC:33889 IMAGE:5297993), complete cds.
ACCESSION BC029525
VERSION BC029525.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1827)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1827)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: m Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734780.
FEATURES Location/Qualifiers
source 1..1827
/db_xref="H-InvDB:HIT000040803"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33889 IMAGE:5297993"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1827
/gene="MAGEB18"
/gene_synonym="MGC33889"
/db_xref="GeneID:286514"
/db_xref="HGNC:HGNC:28515"
CDS 188..1219
/gene="MAGEB18"
/gene_synonym="MGC33889"
/codon_start=1
/product="melanoma antigen family B, 18"
/protein_id="AAH29525.1"
/db_xref="GeneID:286514"
/db_xref="HGNC:HGNC:28515"
/translation="MPRGQKSKLRAREKRHQARCENQDLGATQATVAEGESPSSAYLL
FGDRPQNLPAAETPSIPEALQGAPSTTNAIAPVSCSSNEGASSQDEKSLGSSREAEGW
KEDPLNKKVVSLVHFLLQKYETKEPITKGDMIKFVIRKDKCHFNEILKRASEHMELAL
GVDLKEVDPIRHYYAFFSKLDLTYDETTSDEEKIPKTGLLMIALGVIFLNGNRAPEEA
VWEIMNMMGVYADRKHFLYGDPRKVMTKDLVQLKYLEYQQVPNSDPPRYEFLWGPRAH
AETSKMKVLEFVAKIHDTVPSAFPSCYEEALRDEEQRTQARAAARAHTAAMANARSRT
TSSSFSHAK"
BASE COUNT 540 a 360 c 424 g 503 t
ORIGIN
1 aatgtgggcg tggccggaca tgtttctctt gacctatctt ccacatcatc aagctgttac
61 gggcgaaacc ttggtctgaa acatgcggcc agagaaataa atctcaggat ccggcaggtg
121 tcaaaggtgc cctcttcatc aattcaactg cctgcactat tgtctgtagt ccctgacaag
181 agtaattatg cctcgaggtc agaagagtaa gctccgtgcc cgtgagaaac gccaccaggc
241 tcgttgtgag aatcaggatc tgggagctac gcaggccact gtggcagaag gagagtcacc
301 ctcctctgcc tatcttctct ttggtgacag accccagaat ttgcctgctg ctgagacacc
361 tagcatccct gaagcgcttc agggagcccc atccaccacc aatgctattg cacctgtttc
421 atgcagttca aatgaaggtg ccagcagcca agatgagaaa agtctaggtt cctcaaggga
481 agctgagggc tggaaagaag atcctttaaa caagaaagta gtgtcgctgg tgcatttctt
541 gcttcagaag tatgaaacga aagagccaat tacaaaggga gatatgataa agtttgttat
601 caggaaggat aagtgtcact tcaatgagat cctcaagaga gcctctgagc acatggagct
661 ggcacttggt gttgatttga aggaagtgga tcccatcagg cactactatg cctttttcag
721 caaattagac ctcacctatg atgaaacaac cagtgatgaa gaaaaaattc ccaagactgg
781 cctcctgatg attgcactgg gtgtgatctt tctgaatggc aaccgtgccc cagaagaggc
841 agtctgggaa attatgaata tgatgggtgt atatgctgat aggaagcact tcctctatgg
901 ggatcccagg aaggtcatga ccaaagattt ggtgcagcta aagtacctgg agtaccagca
961 agtgcccaac agtgatcctc cacgctatga attcctgtgg ggtccaagag ctcacgctga
1021 aactagcaag atgaaagtcc tggagtttgt agccaagata catgataccg tccctagtgc
1081 cttcccatcc tgctatgaag aggctttgag ggatgaggaa cagagaaccc aagccagagc
1141 tgcagccagg gctcatactg ctgccatggc aaatgcacgt tccagaacca cgtctagcag
1201 cttctcccat gctaagtgaa atctgaggct tgttcttcac tttttggtcg aaaaggttac
1261 atttcaaatg ttcaagtctg aagattgttt tctttgtgga agagaagagc agtcaacatt
1321 ctaagtagtg aatggccaga gtgcgtctgg agggaacacg gcatatatca ttttgtgtta
1381 atagtctata gtaactcgga gttgtatctt tttctttctt ttttttttgg tgttatattt
1441 caaatgttgt tgcttataat agaagtttta gataacttca gaatctatat ttattaatga
1501 ctttggttac acacgtattg ctatttaaga gtaggagttt tattgttctg taaaacaaat
1561 tgggaaacct tctttcatat ttaatgagcc agaacaagga aacacagtat tggaataggt
1621 atttccttaa aaaatgtgag atgatttagc agtaaaattt tggagatcaa aacataggtg
1681 agaaaaagta aacttttcag ttcttggttt tctttttcca ttttagtctg ttatataaaa
1741 ataaaagtca tacctggatt ggcttagttt actgaagaag gtaggaagaa ataaaatgtt
1801 tatgaaccag cgaaaaaaaa aaaaaaa
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