LOCUS BC029519 931 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens radial spoke head 9 homolog (Chlamydomonas), mRNA
(cDNA clone MGC:33840 IMAGE:5296237), complete cds.
ACCESSION BC029519
VERSION BC029519.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 931)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 931)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: k Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32964824.
FEATURES Location/Qualifiers
source 1..931
/db_xref="H-InvDB:HIT000040797"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33840 IMAGE:5296237"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..931
/gene="RSPH9"
/db_xref="GeneID:221421"
/db_xref="HGNC:HGNC:21057"
/db_xref="MIM:612648"
CDS 27..857
/gene="RSPH9"
/codon_start=1
/product="radial spoke head 9 homolog (Chlamydomonas)"
/protein_id="AAH29519.1"
/db_xref="GeneID:221421"
/db_xref="HGNC:HGNC:21057"
/db_xref="MIM:612648"
/translation="MDADSLLLSLELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRV
LFWGRILGLVADYYIAQGLSEDQLAPRKTLYSLNCTEWSLLPPATEEMVAQSSVVKGR
FMGDPSYEYEHTELQKVNEGEKVFEEEIVVQIKEETRLVSVIDQIDKAVAIIPRGALF
KTPFGPTHVNRTFEGLSLSEAKKLSSYFHFREPVELKNKTLLEKADLDPSLDFMDSLE
HDIPKGSWSIQMERGNALVVLRSLLWPGLTFYHAPRTKNYGYVYVGTGEKNMDLPFML
"
BASE COUNT 210 a 259 c 260 g 202 t
ORIGIN
1 gggcgttgag cggagccgct gacctgatgg acgccgacag cctcctgctg tctctggagc
61 tggcgtccgg cagtgggcag ggcctcagcc cggaccgtcg ggcctcgctg ctcacgtctc
121 ttatgctggt taagcgcgac taccgctatg atcgggttct cttctggggc cgcatccttg
181 gcctcgtcgc cgattactac atcgcgcagg gcctgagtga ggaccagctc gcaccgcgca
241 agacgctcta tagcctgaac tgcacagagt ggagcctctt gccccctgcc acagaggaga
301 tggtggcgca gtcgtctgtg gtgaagggcc gcttcatggg ggacccatca tacgaatatg
361 aacacactga gctgcagaag gtgaatgaag gtgaaaaagt ctttgaagaa gaaatagtgg
421 tccagatcaa ggaagagacc cgcttggtgt ctgtcattga ccagattgac aaggctgtgg
481 ccatcatccc ccgaggcgcc ctcttcaaga ccccttttgg acccacccat gtcaatcgga
541 cctttgaagg actgtccttg tctgaggcca agaagctcag ctcctacttc catttcaggg
601 agcctgttga gctaaagaat aagaccttgc ttgagaaggc tgacctggac ccctccctgg
661 atttcatgga ctccttggag catgacattc ccaaagggtc ctggagcatc cagatggaga
721 ggggcaatgc cctggtggtg ctgcgcagcc tgctctggcc gggcctcacc ttctaccatg
781 ctccccgcac caagaactat ggctacgtct acgtgggcac tggcgagaag aacatggact
841 tgcccttcat gctatagaat gggagccagc ctggatgttt ttaaacagag tctaaacatg
901 attttcttaa gcttccaaaa aaaaaaaaaa a
//