LOCUS BC029508 1561 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 68, mRNA (cDNA clone
MGC:33688 IMAGE:5297655), complete cds.
ACCESSION BC029508
VERSION BC029508.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1561)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1561)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376817.
FEATURES Location/Qualifiers
source 1..1561
/db_xref="H-InvDB:HIT000040790"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33688 IMAGE:5297655"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1561
/gene="CCDC68"
/gene_synonym="SE57-1"
/db_xref="GeneID:80323"
/db_xref="HGNC:HGNC:24350"
CDS 230..1237
/gene="CCDC68"
/gene_synonym="SE57-1"
/codon_start=1
/product="coiled-coil domain containing 68"
/protein_id="AAH29508.1"
/db_xref="GeneID:80323"
/db_xref="HGNC:HGNC:24350"
/translation="MTTVTVTTEIPPRDKMEDNSALYESTSAHIIEETEYVKKIRTTL
QKIRTQMFKDEIRHDSTNHKLDAKHCGNLQQGSDSEMDPSCCSLDLLMKKIKGKDLQL
LEMNKENEVLKIKLQASREAGAAALRNVAQRLFENYQTQSEEVRKKQEDSKQLLQVNK
LEKEQKLKQHVENLNQVAEKLEEKHSQITELENLVQRMEKEKRTLLERKLSLENKLLQ
LKSSATYGKSCQDLQREISILQEQISHLQFVIHSQHQNLRSVIQEMEGLKNNLKEQDK
RIENLREKVNILEAQNKELKTQVALSSETPRTKVSKAVSTSELKTEGVSPYLMLIRLR
K"
BASE COUNT 577 a 296 c 327 g 361 t
ORIGIN
1 gagagccaag cctgcgggcg gtggcggctg cactcgcagg gccctggcag ccgaccctgg
61 ccccaaggtc cgatcgccca ggggaggagc agcaccggga ccccgcgtcg gctgggcgcc
121 ccacaaggga agccagtctt aatatgatgg aaacatctct gaacttctaa aagaccaagg
181 ttggcgtttt agctctatta attttacttc gtcttggcca gaattcacaa tgacaacagt
241 gacagtgacc acagaaattc ccccaaggga taagatggaa gataattctg ccttgtatga
301 gtctacgtcc gctcacatta ttgaagaaac cgagtatgtg aaaaagattc gaactactct
361 gcaaaagatc aggacccaga tgtttaaaga tgaaataaga catgacagta caaatcacaa
421 actagatgca aagcactgtg gaaaccttca acagggctct gattctgaaa tggatccttc
481 ttgttgcagt ttggatttgc ttatgaaaaa gataaaagga aaagacctac agctcttaga
541 aatgaacaaa gagaatgaag tattgaaaat caaactgcaa gcctccagag aagcaggagc
601 agcagctctg agaaacgtgg cccagagatt atttgaaaac taccaaacgc aatctgaaga
661 agtgagaaag aagcaggagg acagtaaaca attactccag gttaacaagc ttgaaaaaga
721 acagaaattg aaacaacatg ttgaaaatct gaatcaagtt gctgaaaaac ttgaagaaaa
781 acacagtcaa attacagaat tggagaacct tgtacagaga atggaaaagg aaaagagaac
841 actactagaa agaaaactgt ctttggaaaa caagctactg caactcaaat ccagtgctac
901 atatggaaaa agttgccagg atcttcagag ggagatttcc attctccagg agcagatctc
961 tcatctgcag tttgtgattc actcccaaca tcagaacctg cgcagtgtca tccaggagat
1021 ggaaggatta aaaaataatt taaaagaaca agacaaaaga attgaaaatc tcagagaaaa
1081 ggttaacata cttgaagccc agaataaaga actaaaaacc caggtagcac tttcatctga
1141 aactcctagg acaaaggtat ctaaggctgt ctctacaagt gaattgaaga ccgaaggtgt
1201 ttccccttat ttaatgttga ttaggttacg gaaatgaact ggctggatga agatctgatt
1261 tagaaagact gcgtgagtct tatttattct ctgaaacaca gcccaagttt catgttaaaa
1321 tggcaaaatg ccattattta aatggaactt attacatacc aatggctttg caagaagatg
1381 acatttcaga agatcaaaca aatctatatt taatggatgg actcttcaaa acttaccaaa
1441 tagttgaaga aaccaggtgc cttctcatga tggaagacag attctgcttt aaattaaaaa
1501 aaaaaaaaat ctgaatcttg ttttcagatt tttttttcta ctgagaaaaa aaaaaaaaaa
1561 a
//