LOCUS BC029494 1450 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ribonuclease P/MRP 38kDa subunit, mRNA (cDNA clone
MGC:33080 IMAGE:5271044), complete cds.
ACCESSION BC029494
VERSION BC029494.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1450)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1450)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: a Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33859836.
FEATURES Location/Qualifiers
source 1..1450
/db_xref="H-InvDB:HIT000040779"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33080 IMAGE:5271044"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1450
/gene="RPP38"
/gene_synonym="RP11-455B2.5"
/db_xref="GeneID:10557"
/db_xref="HGNC:HGNC:30329"
/db_xref="MIM:606116"
CDS 498..1349
/gene="RPP38"
/gene_synonym="RP11-455B2.5"
/codon_start=1
/product="ribonuclease P/MRP 38kDa subunit"
/protein_id="AAH29494.1"
/db_xref="GeneID:10557"
/db_xref="HGNC:HGNC:30329"
/db_xref="MIM:606116"
/translation="MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFI
LQTLEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVS
GWTPAHVRKQLAIGVNEVTRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQ
VPRLSERIAPVIGLKCVLALAFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGEN
LETEPLESQDRELLDTSFEDLSKPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPK
SKKATPK"
BASE COUNT 411 a 370 c 374 g 295 t
ORIGIN
1 gtgggttcca ggtgggcgcg cggggcccac gtagggcagg aggccagccc cggggggatc
61 gggcccggga ctctgcggaa tctggaggcc gaagcccgcg cgcacgcagg gtctctgctg
121 cttccccaac gcctgttgcg tggccgcagg acccgccgcc ctcccggttg ggccgcccag
181 tcccgggccg ggcgcgtgca cccagagctt ccgcgtttct agtccggctc ctctgctgga
241 ttgcagcgcc ggctgggcac caggagtaca aagcgaaaac ccccgccggc ccttctgttc
301 tccacggtct ccaaggagac acggacaaca gaacaacact tccgtgtgct aaatagtaaa
361 gcaccaagac agggtcagat gtgttactgg gctggagtgt ggtggcacaa tcacgctcac
421 tgcatccttg acctcctggg ctcaagtgat cttcccacct cagcctccca agtagctggg
481 actacaggat tttcaaaatg gctgcagctc ctcaagcacc ggggcgggga tctctccgta
541 agacgagacc tctggttgtg aagacgtcgt tgaacaaccc atacatcatc cgctggagcg
601 ctctggagag cgaggatatg cacttcatcc tacagacgct tgaggacagg cttaaagcta
661 ttggacttca gaagattgaa gataagaaga aaaagaacaa aacacctttt ctgaaaaaag
721 aaagcagaga gaaatgcagc attgctgttg atattagtga gaatctgaag gagaagaaaa
781 cagatgctaa gcagcaagtg tcagggtgga cgcctgcaca cgtcaggaag cagcttgcca
841 ttggcgttaa cgaagttacc agagccctgg aaaggaggga actgctgtta gttctggtgt
901 gtaaatcagt caagcctgcc atgatcacct cacacttgat tcagttaagc ctaagcagaa
961 gtgtccctgc ctgtcaggtc ccccggctca gtgagagaat cgcccccgtc attggcttaa
1021 aatgtgttct agccttggcg ttcaaaaaga acaccactga ctttgtggac gaagtaagag
1081 ccatcatccc cagagtcccc agtttaagtg taccatggct tcaagacaga attgaagatt
1141 ctggggaaaa tttagagact gaacctctgg aaagccaaga cagagagctt ttggacactt
1201 catttgaaga tctgtcaaaa cctaagagaa agcttgctga cggtcggcag gcttctgtaa
1261 cattacaacc ccttaaaata aagaaactga ttccaaaccc taataagata aggaaaccac
1321 ccaaaagtaa aaaagctact ccaaagtaat cttgcataaa cttgtcatgt catacagttt
1381 gtgaaaggac accttgtaaa gaagccttga aactaataaa atgagttata cccagaaaaa
1441 aaaaaaaaaa
//