LOCUS BC029491 1252 bp mRNA linear HUM 06-JUN-2006 DEFINITION Homo sapiens prenyl (decaprenyl) diphosphate synthase, subunit 2, mRNA (cDNA clone IMAGE:5272303), complete cds. ACCESSION BC029491 VERSION BC029491.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1252) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1252) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: d Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 29893561 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1252 /db_xref="H-InvDB:HIT000091829" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5272303" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1252 /gene="PDSS2" /gene_synonym="bA59I9.3" /gene_synonym="hDLP1" /db_xref="GeneID:57107" /db_xref="HGNC:HGNC:23041" CDS 479..1003 /gene="PDSS2" /gene_synonym="bA59I9.3" /gene_synonym="hDLP1" /codon_start=1 /product="PDSS2 protein" /protein_id="AAH29491.1" /db_xref="GeneID:57107" /db_xref="HGNC:HGNC:23041" /translation="MSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQ LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNL NELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQNTKSFSFNGPIAIYQMGDC ESAWILSKHPRALS" BASE COUNT 295 a 307 c 296 g 354 t ORIGIN 1 atgcctccaa tatggcgtcc tccacatagg cagtggctgt ggtttctacc ccgggtggcc 61 gggggcagtg ctgagctggg actgttgttt gcccagcctg ggctgcagaa agcagcagtt 121 aaagttcgtt tctggtcact gctccaggaa gccaccttac tctgagggtc aagaattgcc 181 gcttcctttt agttactgta agttcctcct ctgcccctgg tttgtttccc gcggcacttc 241 tggatacccc caggtcccag acccttccag actcaaacca tgaactttcg gcagctgctg 301 ttgcacttgc cacgttatct tggagcctcg ggttccccgc gtcgcctgtg gtggtcccct 361 gtccctcgac accatctcct cggtgggctc ttggcgtggt cggtcctcca agtccccggc 421 ccactggaat caggtagtgt cagaggcgga gaagatcgtg gggtacccca cgtccttcat 481 gagccttcgc tgcctgctga gcgacgagct cagcaacatc gctatgcagg tgcggaagct 541 ggtgggcact cagcaccctc tgcttaccac agccaggggg cttgtacatg acagctggaa 601 tagcctccag ttgaggggct tggtggtgct ccttatctct aaagcagctg ggcccagcag 661 cgtgaacact tcatgtcaga actatgacat ggtcagtggg atctactcat gtcaaagaag 721 tttggcagag atcacggagc taattcatat tgctctcctt gtacatcgtg ggatagtaaa 781 tttaaatgag ttgcaatcat ctgatggtcc actgaaagac atgcaatttg gaaataaaat 841 tgctatcctg agtggagact ttcttctagc aaatgcctgc aatggactag ctctgctaca 901 gaacaccaag tcattttcat ttaatggacc tattgctata tatcagatgg gagactgtga 961 gtcagcctgg atcttgtcta aacacccaag agcattgtca tgatgtcact cctggaggtt 1021 gttctattaa gcattagtga tttatacttc cggataacca gtggcacaga tgtactcttt 1081 acatagctga tgtatttcct tatgttaact ttgttttcct aaaggcgtaa atatgttgtt 1141 taaaatgaag tattttgttt gtacaaatat gctcaattta tgcatataaa tctcccttta 1201 caccatctat atagtttaat aaagatgcta ttgtccaaaa aaaaaaaaaa aa //