LOCUS BC029487 1460 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens transmembrane protein 120A, mRNA (cDNA clone MGC:32944
IMAGE:5277668), complete cds.
ACCESSION BC029487
VERSION BC029487.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1460)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1460)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: h Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13994299.
FEATURES Location/Qualifiers
source 1..1460
/db_xref="H-InvDB:HIT000040775"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32944 IMAGE:5277668"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1460
/gene="TMEM120A"
/gene_synonym="TMPIT"
/db_xref="GeneID:83862"
/db_xref="HGNC:HGNC:21697"
CDS 47..1015
/gene="TMEM120A"
/gene_synonym="TMPIT"
/codon_start=1
/product="TMEM120A protein"
/protein_id="AAH29487.1"
/db_xref="GeneID:83862"
/db_xref="HGNC:HGNC:21697"
/translation="MQPPPPGPLGDCLRDWEDLQQDFQNIQETHRLYRLKLEELTKLQ
NNCTSSITRQKKRLQELALALKKCKPSLPAEAEGAAQELENRMKERQGLFFDMEAYLP
KKNGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVT
DAAFNFLLVWYYCTLTIRESILINNGSRWAGRALREGSMEWGARTLREAGTGAGGDGG
SLLQDQRLVGVPSLRVHLPVGSHADVVRRSHVPEIPEPIPLLFHVPELRAVSPVLLPE
RLPLPPAGAGRAAHHGPHCGGLPVLDVAGPHLPAAFSFLWTLLAAF"
BASE COUNT 285 a 436 c 430 g 309 t
ORIGIN
1 ggggttgctg cgccgtcctc cactactggc tactggcgct gcagccatgc agcccccgcc
61 cccgggcccg ctgggcgact gcctgcggga ctgggaggat ctacagcagg acttccagaa
121 catccaggag acccatcggc tctaccgcct gaagctggag gagctgacca aacttcagaa
181 caattgcacc agctccatca cgcggcagaa gaagcggctc caggagctgg ccctcgccct
241 gaagaaatgc aaaccctccc tcccagcaga ggccgagggg gccgcacagg agctggagaa
301 ccggatgaaa gagcgccaag gcctcttctt tgacatggag gcctatttgc ctaagaagaa
361 tggattgtac ctgagcctgg ttctggggaa cgtcaacgtc acgctcctga gcaagcaggc
421 taagtttgcc tacaaggacg agtatgagaa gttcaagctc tacctcacca tcatcctcat
481 cctcatctcc ttcacttgcc gcttcctgct caactccagg gtgacagatg ctgccttcaa
541 cttcctgctg gtctggtact actgcaccct gaccatccgg gagagcatcc tcatcaacaa
601 cggctcccgg tgggcagggc gggccctgag ggaggggagc atggaatggg gtgccaggac
661 cctccgggaa gcaggaacag gcgctggggg tgatggtggc tctctgctcc aggatcaaag
721 gctggtgggt gttccatcac tacgtgtcca ccttcctgtc gggagtcatg ctgacgtggt
781 ccgacggtct catgtaccag aaattccgga accaattcct ctccttttcc atgtaccaga
841 gcttcgtgca gtttctccag tactactacc agagcggctg cctctaccgc ctgcgggcgc
901 tgggcgagcg gcacaccatg gacctcactg tggagggctt ccagtcctgg atgtggcggg
961 gcctcacctt cctgctgcct tttcttttct ttggacactt ctggcagctt tttaacgcgc
1021 tgacgttgtt caacctggcc caggaccctc agtgcaagga gtggcaggtg agccggggtc
1081 cctggacagg atggatgggg ggccaggcac atgtccagcc ctcaccctat tcctccggca
1141 ggtgcttatg tgcggctttc ccttcctcct ccttttcctc ggcaatttct tcaccaccct
1201 gagggttgtg caccacaagt ttcacagtca gcggcacggg agcaagaagg attgaggctg
1261 ggccttcccc tgccggccca gaggggcttc tgtcctgtgt gttgtgggag gggatgggag
1321 gcgcccctcg agtgtgcgtg tatcaggggg tctcttctat tctcccttgg gttttatggg
1381 cgctgtgggc cgtgaaggaa gacctgggcc cagtgccctc aataaagaga ggcccagagg
1441 tggcaaaaaa aaaaaaaaaa
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