LOCUS BC029429 1223 bp mRNA linear HTC 19-NOV-2003
DEFINITION Homo sapiens SRY (sex determining region Y)-box 6, mRNA (cDNA clone
IMAGE:4046207), with apparent retained intron.
ACCESSION BC029429
VERSION BC029429.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1223)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1223)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15277412
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1223
/db_xref="H-InvDB:HIT000091793"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4046207"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 406 a 236 c 242 g 339 t
ORIGIN
1 atacgtagac aatatccaac ctggacaaaa cgggcttccc ttgcgagccg acctaaaccg
61 catcccccaa agaatagaga ctaaatgcaa agtgagaaga aacagttgaa ggactaggaa
121 gaggatcctc tagggatgag ctggtcactt tcatgaattc aaaggcaatt taccagtgat
181 ttctgggtgc tggggctgat attttttgtg catatttctc acacagtttg atataaactt
241 aagtgaatga attcattaat aaaagcagat tttctatttt tatttcacct ctgggctatt
301 ttataccttt ggagcacaca agcacaacaa aagaagaatg tcttccaagc aagccacctc
361 tccatttgcc tgtgcagctg atggagagga tgcaatgacc caggatttaa cctcaaggga
421 aaaggaagag ggcagtgatc aacatgtggc ctcccatctg cctctgcacc ccataatgca
481 caacaaacct cactctgagg agctaccaac acttgtcagt accattcaac aagatgctga
541 ctgggacagc gttctgtcat ctcagcaaag aatggaatca gagaataata agttatgttc
601 cctatattcc ttccgaaata cctctacctc accacataag cctgacgaag ggagtcggga
661 ccgtgagata atgaccagtg ttacttttgg aaccccagag cgccgcaaag ggagtcttgc
721 cgatgtggtg gacacactga aacagaagaa gcttgaggaa atgactcgga ctgaacaaga
781 gggtatgtgt ggacttcact gttgggctct gttttttttc ttctaaagat tccaggcctt
841 aaaaaaaaaa aaaaagtggg atttcaaggg tcagagaagt gcataattgt cactagctag
901 gaaaaagtta ttcagaggtt actatggtga tggcagattt tgatccatta ggagtgttaa
961 acagatagct ccgtttttct aaaactttgt gcattttatt tggttcttaa gataacaaat
1021 taggatttta aactgaccat aatcctactc tggaaaaagg taacaagaga attttcctaa
1081 ctgcaacttt atttttcatt ttttctcccc tatttccttt tggtggatag tatttcttta
1141 taaaaatgtc aactgtttaa aaagcaaaat taaaaatatt tctcttcatt tttaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaa
//