LOCUS BC029420 1368 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens outer dense fiber of sperm tails 2-like, mRNA (cDNA
clone IMAGE:4737945), partial cds.
ACCESSION BC029420
VERSION BC029420.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1368)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1368)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55749707.
FEATURES Location/Qualifiers
source 1..1368
/db_xref="H-InvDB:HIT000091787"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4737945"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_60"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1368
/gene="ODF2L"
/gene_synonym="dJ977L11.1"
/gene_synonym="RP5-977L11.1"
/db_xref="GeneID:57489"
/db_xref="HGNC:HGNC:29225"
CDS 88..>1368
/gene="ODF2L"
/gene_synonym="dJ977L11.1"
/gene_synonym="RP5-977L11.1"
/codon_start=1
/product="ODF2L protein"
/protein_id="AAH29420.1"
/db_xref="GeneID:57489"
/db_xref="HGNC:HGNC:29225"
/translation="MEKAVNDGSHSEELFCHLKTISEKEDLPRCTSESHLSCLKQDIL
NEKTELEATLKEAELVTHSVELLLPLFKDTIEKINFENANLSALNLKISEQKEILIKE
LDTFKSVKLALEHLLRKRDYKQTGDNLSSMLLENLTDNESENTNLKKKVFEKEAHIQE
LSCLFQSEKANTLKANRFSQSVKVVHERLQIQIHKREAENDKSKEYVKSLETKIAKWN
LQSRMNKNEAIVMKEASRQKTVALKKASKVYKQRLDHFTGAIEKLTSQIRDQEAKLSE
TISASNAWKSHYEKIVIEKTELEVQIETMKKQIINLLEDLKKMEDHGKNSCEEILRKV
HSIEYENETLNLENTKLKTTLAALKDEVVSVENELSELQEVEKKQKTLIEMYKTQVQK
LQEAAEIVKSRCENLLHKNNQITKTKKKKKKKKKK"
BASE COUNT 577 a 201 c 262 g 328 t
ORIGIN
1 gacgacgtgc ggacgcagcg gcgggggcct ttcagcttat gtggagaagt cgctgtgaag
61 ccacctataa atccatttac tgaatttatg gagaaggctg taaatgatgg aagtcattca
121 gaagaactct tttgccatct taaaactata tcagagaaag aagatttacc acggtgtacc
181 agtgaaagtc atctcagctg cctgaagcag gacattctaa atgaaaagac tgaattggaa
241 gcaacactta aggaagcgga gttggtaact cattctgtag aattgctttt gccactattt
301 aaggacacca ttgaaaagat taattttgaa aatgcgaatc tttctgcatt gaatttgaag
361 atttctgaac agaaggaaat attaataaaa gaattagaca ccttcaaaag tgtaaaacta
421 gctttagaac atcttcttag aaagagagac tacaaacaaa caggagacaa tttatccagc
481 atgttgctag aaaatctaac tgataatgaa agtgaaaata ctaatcttaa gaagaaggta
541 tttgaaaagg aggcccatat ccaagaactt tcttgtttgt ttcagagtga aaaggcaaat
601 actttgaaag caaaccgttt ttcccaatca gtaaaagtag tacatgaacg actacagatc
661 caaattcata aaagggaagc tgagaacgat aagtcgaaag aatatgtaaa gagcttagaa
721 accaagatag ccaagtggaa cctgcaatca agaatgaata agaatgaggc tatagtgatg
781 aaagaagcaa gtaggcaaaa aactgtagct ttaaaaaagg catctaaagt ttacaaacaa
841 aggcttgacc attttacagg agctattgaa aagcttactt cccaaattag agatcaggaa
901 gccaagttgt ctgaaacaat ttcagcttcc aatgcctgga aaagtcatta tgagaaaatt
961 gtaatagaaa aaaccgaatt ggaagtacag attgaaacaa tgaaaaagca aatcattaat
1021 cttttggaag atctgaagaa aatggaagac catggaaaaa attcatgtga agaaattctt
1081 agaaaagttc actcaattga atatgaaaat gaaactctga atcttgagaa tacaaaatta
1141 aagactacac ttgctgcttt gaaggatgaa gttgtatctg ttgaaaatga actctcagaa
1201 ttgcaagaag tagaaaaaaa acagaaaacc cttattgaaa tgtataaaac tcaggtacaa
1261 aagttgcaag aagcagctga aatagtaaaa agcagatgtg aaaatttgct acataaaaat
1321 aaccaaataa caaaaaccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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