LOCUS BC029289 1793 bp mRNA linear HUM 31-MAR-2005
DEFINITION Homo sapiens T-box, brain, 1, mRNA (cDNA clone IMAGE:5181773),
partial cds.
ACCESSION BC029289
VERSION BC029289.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1793)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1793)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: c Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22547231.
FEATURES Location/Qualifiers
source 1..1793
/db_xref="H-InvDB:HIT000091718"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5181773"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1793
/gene="TBR1"
/gene_synonym="TES-56"
/db_xref="GeneID:10716"
/db_xref="MIM:604616"
CDS 79..>1793
/gene="TBR1"
/gene_synonym="TES-56"
/codon_start=1
/product="TBR1 protein"
/protein_id="AAH29289.1"
/db_xref="GeneID:10716"
/db_xref="MIM:604616"
/translation="MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTD
NLERSSPLKKITRGMTNQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSAA
DRYLLSQSSQPQSAATAPSAMFPYPGQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSL
LSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFH
RHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGK
ADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQ
PRLHVVEVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFR
DNYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAG
AGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQRWFVTPANNRLDFAASAYDTATDFAG
NAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGTKSGSVLPCWP
NSAAAA"
BASE COUNT 385 a 586 c 471 g 351 t
ORIGIN
1 gtctgtggat ttctagttta tgataaatag gactttaaaa accagggacg ggagggcgag
61 tgttcaggtt ctagagctat gcagctggag cactgccttt ctccttctat catgctctcc
121 aagaaatttc tcaatgtgag cagcagctac ccacattcag gcggatccga gcttgtcttg
181 cacgatcatc ccattatctc gaccactgac aacctggaga gaagttcacc tttgaaaaaa
241 attaccaggg ggatgacgaa tcagtcagat acagacaatt ttcctgactc caaggactca
301 ccaggggacg tccagagaag taaactctct cctgtcttgg acggggtctc tgagcttcgt
361 cacagtttcg atggctctgc tgcagatcgc tacctcctct ctcagtccag ccagccacag
421 tctgcggcca ctgctcccag tgccatgttc ccgtaccccg gccagcacgg accggcgcac
481 cccgccttct ccatcggcag ccctagccgc tacatggccc accacccggt catcaccaac
541 ggagcctaca acagcctcct gtccaactcc tcgccgcagg gataccccac ggccggctac
601 ccctacccac agcagtacgg ccactcctac caaggagctc cgttctacca gttctcctcc
661 acccagccgg ggctggtgcc cggcaaagca caggtgtacc tgtgcaacag gcccctttgg
721 ctgaaatttc accggcacca aacggagatg atcatcacca aacagggaag gcgcatgttt
781 ccttttttaa gttttaacat ttctggtctc gatcccacgg ctcattacaa tatttttgtg
841 gatgtgattt tggcggatcc caatcactgg aggtttcaag gaggcaaatg ggttccttgc
901 ggcaaagcgg acaccaatgt gcaaggaaat cgggtctata tgcatccgga ttcccccaac
961 actggggctc actggatgcg ccaagaaatc tcttttggaa aattaaaact tacgaacaac
1021 aaaggagctt caaataacaa tgggcagatg gtggttttac agtccttgca caagtaccag
1081 ccccgcctgc atgtggtgga agtgaacgag gacggcacgg aggacactag ccagcccggc
1141 cgcgtgcaga cgttcacttt ccctgagact cagttcatcg ccgtcaccgc ctaccagaac
1201 acggatatta cacaactgaa aatagatcac aacccttttg caaaaggatt tcgggataat
1261 tatgacacga tctacaccgg ctgtgacatg gaccgcctga ccccctcgcc caacgactcg
1321 ccgcgctcgc agatcgtgcc cggggcccgc tacgccatgg ccggctcttt cctgcaggac
1381 cagttcgtga gcaactacgc caaggcccgc ttccacccgg gcgcgggcgc gggccccggg
1441 ccgggtacgg accgcagcgt gccgcacacc aacgggctgc tgtcgccgca gcaggccgag
1501 gacccgggcg cgccctcgcc gcaacgctgg tttgtgacgc cggccaacaa ccggctggac
1561 ttcgcggcct cggcctatga cacggccacg gacttcgcgg gcaacgcggc cacgctgctc
1621 tcttacgcgg cggcgggcgt gaaggcgctg ccgctgcagg ctgcaggctg cactggccgc
1681 ccgctcggct actacgccga cccgtcgggc tggggcgccc gcagtccccc gcagtactgc
1741 ggcaccaagt cgggctcggt gctgccctgc tggcccaaca gcgccgcggc cgc
//