LOCUS BC029272 2371 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens astrotactin 2, mRNA (cDNA clone IMAGE:5140676),
complete cds.
ACCESSION BC029272
VERSION BC029272.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2371)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2371)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: h Column: 9
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2371
/db_xref="H-InvDB:HIT000040719"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5140676"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2371
/gene="ASTN2"
/gene_synonym="KIAA0634"
/db_xref="GeneID:23245"
CDS 411..1733
/gene="ASTN2"
/gene_synonym="KIAA0634"
/codon_start=1
/product="ASTN2 protein"
/protein_id="AAH29272.1"
/db_xref="GeneID:23245"
/translation="MNTLLCKGMFCLLSWEADSRGRLGEYTLQPLSLQTEETTELGSK
KELKSMPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRRPGKEQLSPT
PVLLEINRVVPLYTLIQDNGTKEAFKSALMSSYWCSGKGDVIDDWCRCDLSAFDANGL
PNCSPLLQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKVDEYTDTDLY
TGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYKFTLYAVDTR
GRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQMAYNTLMEVSASML
FRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLRSAYIQSRVE
TVPYLFCRSEEVRPAGMVWYSILKDTKIMCEEKMVSMARNTYGESKGR"
misc_feature 534..818
/gene="ASTN2"
/gene_synonym="KIAA0634"
/note="MACPF; Region: membrane-attack complex / perforin"
/db_xref="CDD:smart00457"
BASE COUNT 566 a 605 c 647 g 553 t
ORIGIN
1 ccaagcgcgc ggggcaaggc ggccctgcag gggtgagctt tcctctgaga acccggggcc
61 ttagcgacac gtaatccagt tttccgtctc cttggtgcag atgaagaaac cgacgcccat
121 gggcgaaagg gacctgctca agttcactca gtaagtcagg agataagcca gaatgcgtat
181 ctgactccag tctcaatgtc taccccttca caaaacggta gcctccaggg tagtcctcag
241 caaagcgttg gcaccttact gaatctgttt ttccatctga gaaatgggcc aacggaaaaa
301 tcaaacttcc attctgggga agtcgagaac cgggactccc taggaagggc agtgctttgg
361 cctcatgttc tgtgctctga cagagagctg cactagagac aagtttatcc atgaacacat
421 tgctctgtaa aggaatgttt tgcctactca gctgggaggc cgacagcaga ggcagacttg
481 gggagtacac tctgcagccc ctgtccctgc agactgaaga gaccacagag ctgggcagca
541 agaaggagct caagtccatg cccttcatca cctacctctc aggtttgctg acagcccaga
601 tgctgtcaga tgaccagctc atttcaggtg tggagattcg ctgtgaggag aaggggcgct
661 gtccatctac ctgtcacctt tgccgccggc caggcaagga gcagctgagc cccacaccag
721 tgctgctgga aatcaaccgt gtggtgccac tttataccct catccaagac aatggcacaa
781 aggaggcctt caagagtgca ctgatgagtt cctactggtg ctcagggaaa ggggatgtga
841 tcgatgactg gtgcaggtgt gacctcagcg cctttgatgc caatgggctc cccaactgca
901 gcccccttct gcagccggtg ctgcggctgt ccccaacagt ggagccctcc agtactgtgg
961 tctccttgga gtgggtggat gttcagccag ctattgggac caaggtctcc gactatattc
1021 tgcagcataa gaaagtggat gaatacacag acactgacct gtacacagga gaattcctga
1081 gttttgctga tgacttactc tctggcctgg gcacatcttg tgtagcagct ggtcgaagcc
1141 atggagaggt ccctgaagtc agtatctact cagtcatctt caagtgtctg gagcccgacg
1201 gtctctacaa gttcactctg tatgctgtgg atacacgagg gaggcactca gagctaagca
1261 cggtgaccct gaggacggcc tgtccactgg tagatgacaa caaggcagaa gaaatagctg
1321 acaagatcta caatctgtac aatgggtaca caagtggaaa ggagcagcag atggcctaca
1381 acacactgat ggaggtctca gcctcgatgc tgttccgagt ccagcaccac tacaactctc
1441 actatgaaaa gtttggcgac ttcgtctgga gaagtgagga tgagctgggg cccaggaagg
1501 cccacctgat tctacggcga ctggagaggg tgagtagcca ctgctccagc ctcctgcgga
1561 gtgcctacat ccagagccgc gtggaaacag tgccctatct tttctgccgc agcgaggagg
1621 tccggcctgc aggcatggtg tggtatagca tcctcaagga caccaaaatc atgtgtgagg
1681 agaagatggt gtcaatggcc cgaaacacgt acggggagtc caagggccgg tgagggaggg
1741 tattgccctc cgtgagcaca gagactctcc atgggagggg gagcagtatt ctcctggatc
1801 ctggggcctg ggtgggctgg gggacagctg aggatgggcc tagcagatga agcttgccag
1861 caaggccaaa gcaaacggtt tctcctgtgg atagtggaca gagacctttg taaccaatgg
1921 aattattcat ttttctctat cttttatttt ttcaaagata ttatttgact ctatcaaaag
1981 tctctccttt ttaaaccttt tcttatggat ggctgtcaat cccaaggcag aagttttcag
2041 gtggagacca agcggccttt gctcttcttc cttcttcctg ccacactctg ctttcttcct
2101 gccatggacc cctggaggag acctatggag ggacagtttt gacctgaccc ctagaggaga
2161 cagttttgac ctcttcagca ccaggaagga agctctgagg atggttgcag tgaggaagca
2221 tgggtcttta aggacttctc tctctttttt gctggacatt attgagtttg tgggaccctg
2281 cctcttcctg ctacctgtgg gtctgcccag agtccctgca ggcctgtcca tgcattaaaa
2341 attcctattg tctctcaaaa aaaaaaaaaa a
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