LOCUS BC029191 1613 bp mRNA linear HUM 03-AUG-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 175, mRNA (cDNA clone
IMAGE:5172517), partial cds.
ACCESSION BC029191
VERSION BC029191.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1613)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1613)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: i Column: 9.
FEATURES Location/Qualifiers
source 1..1613
/db_xref="H-InvDB:HIT000091701"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5172517"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1613
/gene="C1orf175"
/gene_synonym="FLJ46354"
/db_xref="GeneID:374977"
CDS <1..1492
/gene="C1orf175"
/gene_synonym="FLJ46354"
/codon_start=2
/product="C1orf175 protein"
/protein_id="AAH29191.1"
/db_xref="GeneID:374977"
/translation="PVTKEGRASIVPLAAASGLCELLSVNSCMGRVRRIYPQLLLALL
IQVHYHIGLNLPGCVAPPKDTKKGAQPSPFVPVRWVVKVVKTLLLRMGCSYETTFLED
QGGWELMEQVESHHRGVALLARAMVQYSCQELCRILYLLIPLLERGDEKHRITATAFF
VELLQMEQVRRIPEEYSLGRMAEGLSHHDPIMKVLSIRGLVILARRSEKTAKVKALLP
SMVKGLKNMDGMLVVEAVHNLKAVFKGRDQKLMDSAVYVEMLQILLPHFSDAREDVRS
SCINLYGKVVQKLRAPRTQAMEEQLVSTLVPLLLTMQEGNSKVSQCVKTLLRCSYFMA
WELPKRAYSRKPWDNQQQTVAKICKCLVNTHRDSAFIFLSQSLEYAKNSRASLRKCSV
MFIGSLVPCMESIMTEDRLNEVKAALDNLRHDPEASVCIYAAQVQDHILASCWQNSWL
PHGNSWVCYSATTHRWSPSCENLPTSHQRRSWIMQALGSWKMSLKK"
BASE COUNT 373 a 478 c 462 g 300 t
ORIGIN
1 gcccgtcacc aaggagggcc gggcttccat cgtgcccctg gcggcagcca gcggcctgtg
61 cgagctcctg tccgtcaaca gctgcatggg ccgtgtgagg cgcatctacc ctcagctgct
121 cctggccctg ctcattcagg tccattacca catcggcctc aacctgcctg gctgcgtggc
181 tcctcccaag gacaccaaga agggtgcaca gccctctccc ttcgtacctg tgcgctgggt
241 ggtgaaagtg gtgaaaaccc tgctactgag gatgggctgc tcttatgaga ccacgtttct
301 ggaggaccag ggtggctggg agctcatgga gcaggtggag agccaccacc gcggagtggc
361 cttgctggca agggccatgg tgcagtactc ctgccaggag ctgtgccgca tcctctacct
421 gctcatcccg ctcctggagc gaggcgacga gaagcacagg atcacggcca ccgccttctt
481 cgtggagctc ctccagatgg agcaggtgcg ccggatcccc gaggaatact ctctggggcg
541 gatggcagaa ggcctgagcc accacgaccc catcatgaag gtgctgtcca ttcgaggcct
601 ggtcatcctg gcccgcaggt ctgagaagac cgccaaggtg aaggccctcc tgccctccat
661 ggtgaagggc ctgaagaaca tggatgggat gctggtggtg gaagcggtcc acaacctcaa
721 ggctgtcttc aaggggcggg accagaagct gatggacagt gcggtctatg tggagatgct
781 gcagatcctg ctgccgcact tcagcgacgc acgagaggac gtgcgctcct cctgcatcaa
841 cctgtatggg aaggtggtcc agaagcttcg ggcaccacgc actcaggcca tggaggagca
901 gctggtcagc accttggtgc ccctactgct gaccatgcag gagggcaact ccaaggtaag
961 ccagtgtgtg aagaccctgt tacgctgttc ttacttcatg gcttgggagt tgccaaaaag
1021 agcttatagc cggaagccct gggacaacca acagcagaca gtggccaaaa tttgcaagtg
1081 ccttgtgaac acccaccgag acagcgcctt catattcctc agccagagcc tggagtatgc
1141 caagaactca cgggcctccc tccggaagtg ctcagtcatg ttcatagggt ccctggtccc
1201 ctgcatggag agcataatga cagaagatcg tctgaatgaa gtgaaagctg ctctggataa
1261 cttgagacat gacccagaag catcagtgtg catctacgca gcccaggtcc aggaccacat
1321 cctggccagc tgctggcaga actcctggct gccgcacggg aactcatggg tgtgttactc
1381 agccaccacc caccgctgga gccccagctg tgagaacctg cccacttccc accagcggcg
1441 ctcctggatc atgcaggcac tgggctcctg gaagatgtcc ttgaagaagt gacgtccctg
1501 agccccaaac cctcctcagg gtggttgagt tccagccatg ctccctataa atgtcatgtg
1561 gcttaccaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//