LOCUS BC029162 2298 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens dpy-19-like 3 (C. elegans), mRNA (cDNA clone
IMAGE:5190889), complete cds.
ACCESSION BC029162
VERSION BC029162.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2298)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2298)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: j Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23397480
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2298
/db_xref="H-InvDB:HIT000040700"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5190889"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2298
/gene="DPY19L3"
/gene_synonym="MGC35440"
/db_xref="GeneID:147991"
/db_xref="HGNC:HGNC:27120"
CDS 158..466
/gene="DPY19L3"
/gene_synonym="MGC35440"
/codon_start=1
/product="dpy-19-like 3 (C. elegans)"
/protein_id="AAH29162.1"
/db_xref="GeneID:147991"
/db_xref="HGNC:HGNC:27120"
/translation="MMSIRQRREIRATEVSEDFPAQEENVKLENKLPSGCTSRRLWKI
LSLTIGGTIALCIGLLTSVYLATLHENDLWFSNIKVWSFFDHCIIHSVGSPVVSHVDE
"
BASE COUNT 689 a 473 c 475 g 661 t
ORIGIN
1 cggttctgcc ctccttgtac ccgcggcgcg ctgcggcccg tggcgcggcc ccgttcccgc
61 ctagccccgt cggcctcctt cccctcccgg agccgcgcgt gaggacggct gaggccgcag
121 gagtgatttg gagaacaatg catgtaagtc tgacatcatg atgtccatcc ggcaaagaag
181 agaaataaga gccacagaag tttctgaaga ctttccagcc caagaagaaa atgtgaagtt
241 ggaaaataaa ttgccatctg gttgtaccag tagaagatta tggaagattt tgtcattgac
301 aattggtgga accattgccc tttgcattgg acttcttaca tctgtctacc ttgccacgtt
361 acatgaaaat gatttatggt tttctaatat taaggtatgg agtttctttg accattgtat
421 cattcactca gtgggatctc cagtagtaag ccatgtggat gaatgaccaa ggcaacacag
481 ttttgccata aagaatccaa tctctagaaa ggttggacta tagagtgaaa taacttttgt
541 gtttattatt ttaaaataac atattagaat ctttttttaa atttttcttt attatttatt
601 tatttttgag atggagtctc actctgtcac ccaggctgga gtgcggtggc gcaatcttgg
661 ctcactacaa cctctgcctc gcaggttcag gtgattcttc tggcttagcc tcccaagtag
721 ctgggactat aggtgcgtgc caccacaccc agctaatttt tgtattttta ctagagacgg
781 ggtttcagca tattgaccag gctgatctcg gactcctgac cttgtgatct gcctgtctca
841 gcctcccaaa gtgctgggat tacaggcgtg agccactgcg tccagccaga atctttattt
901 ttcattttaa ttttttgaga tagggtattg ctctgtcgcc caggctggaa tgcagtggtg
961 caaacatggg tcgctgcagc ctcaacctcc tgggctcaag tgagtatcct gcctaagctt
1021 cctgtgtcac tgggacccca ggcatgcacc acctcaccaa gctaaatttg atttttttgt
1081 agagacaggg tctcactttg ttgcccatgc tggtctcgaa ctcctgggct caagcgatcc
1141 tactgccctg gtcttccaaa atatgagaat gagccatagc acccagccca gaatttttat
1201 aatcaagtga gttttttctt tttcattaac ttattccatt tatttagcag ttattctaaa
1261 ttagtatttt tcaagttata gattgtgaaa ttagtgcagt aggtcatgag taacattttt
1321 cttaatgaaa tcaaaaagaa agaatactat cacatctagt agggttgagg attgttttgt
1381 gaaactttta attttatata tatatatata tgcacaaact gggtcacagt atacaaggta
1441 cttccttttc ttttttttct tgttggctac aacaggaaaa aaaaaaaaac agaaaaggaa
1501 ataaaaaagc cactgcttta aatcatgggg tctaaatgtg gctccacaga gggtcctcag
1561 catgttcatg actatctaat actctgtgca agtggttttg cagggcatag ggcgatgggg
1621 aagccatatg tttccaggga aaggaactgt aattttaatc agattttcag gagggttagc
1681 cgggcgtcac gcctgtaatc ccagcacttt gggaggtcga ggcgggcaga tcacttgaag
1741 tcaggagttc aagaccagcc tggccaacat ggtggaaccc tatctctact aaaaatacaa
1801 aaattagccg ggcatggtga cacacacctg taatctcagc tactcaggag gctgaggcac
1861 aagaatcact tgaactcggg aggaagaggt tgcagtgagc tgagatccca ccactgcact
1921 ccagcctggg cgacagagca atactcttta tcaaaaaaaa aaagaaaaaa gttgaggggg
1981 tggtctgtga ctctttaaac acgtttcctt gttttctttc tctctctctt tttcaacatt
2041 tctagaactc ctcttggcat tgttttcaga actcgtatat aacttacatg tggaaatttg
2101 catccaaata taccttacat tttaatctaa tatgtcatga tctttaacct aaactgtggt
2161 gtctaatgac tagttgcttg taaaaataaa caaacacctt caaagccaaa aaaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2281 aaaaaaaaaa aaaaaaaa
//