LOCUS BC029128 1455 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens aspartoacylase (Canavan disease), mRNA (cDNA clone MGC:34517 IMAGE:5180104), complete cds. ACCESSION BC029128 VERSION BC029128.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1455) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1455) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 50 Row: a Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557334. FEATURES Location/Qualifiers source 1..1455 /db_xref="H-InvDB:HIT000040686" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34517 IMAGE:5180104" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1455 /gene="ASPA" /gene_synonym="ACY2" /gene_synonym="ASP" /db_xref="GeneID:443" /db_xref="HGNC:HGNC:756" /db_xref="MIM:608034" CDS 136..1077 /gene="ASPA" /gene_synonym="ACY2" /gene_synonym="ASP" /codon_start=1 /product="aspartoacylase (Canavan disease)" /protein_id="AAH29128.1" /db_xref="GeneID:443" /db_xref="HGNC:HGNC:756" /db_xref="MIM:608034" /translation="MTSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRT GLEVKPFITNPRAVKKCTRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGP KDSEDSYDIIFDLHNTTSNMGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHP SLKYATTRSIAKYPVGIEVGPQPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPC AIEVYKIIEKVDYPRDENGEIAAIIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDC TVYPVFVNEAAYYEKKEAFAKTTKLTLNAKSIRCCLH" BASE COUNT 495 a 268 c 260 g 432 t ORIGIN 1 ctccactcaa gggaattctg tactttgccc tttgggtaaa gtctcattta catttctaaa 61 cctttcttaa gaaaatcgaa tttcctttga tctctcttct gaattgcaga aatcagataa 121 aaactacttg gtgaaatgac ttcttgtcac attgctgaag aacatataca aaaggttgct 181 atctttggag gaacccatgg gaatgagcta accggagtat ttctggttaa gcattggcta 241 gagaatggcg ctgagattca gagaacaggg ctggaggtaa aaccatttat tactaacccc 301 agagcagtga agaagtgtac cagatatatt gactgtgacc tgaatcgcat ttttgacctt 361 gaaaatcttg gcaaaaaaat gtcagaagat ttgccatatg aagtgagaag ggctcaagaa 421 ataaatcatt tatttggtcc aaaagacagt gaagattcct atgacattat ttttgacctt 481 cacaacacca cctctaacat ggggtgcact cttattcttg aggattccag gaataacttt 541 ttaattcaga tgtttcatta cattaagact tctctggctc cactaccctg ctacgtttat 601 ctgattgagc atccttccct caaatatgcg accactcgtt ccatagccaa gtatcctgtg 661 ggtatagaag ttggtcctca gcctcaaggg gttctgagag ctgatatctt ggatcaaatg 721 agaaaaatga ttaaacatgc tcttgatttt atacatcatt tcaatgaagg aaaagaattt 781 cctccctgcg ccattgaggt ctataaaatt atagagaaag ttgattaccc ccgggatgaa 841 aatggagaaa ttgctgctat catccatcct aatctgcagg atcaagactg gaaaccactg 901 catcctgggg atcccatgtt tttaactctt gatgggaaga cgatcccact gggcggagac 961 tgtaccgtgt accccgtgtt tgtgaatgag gccgcatatt acgaaaagaa agaagctttt 1021 gcaaagacaa ctaaactaac gctcaatgca aaaagtattc gctgctgttt acattagaaa 1081 tcacttccag cttacatctt acacggtgtc ttacaaattc tgctagtctg taagctcctt 1141 aagagtaggg ttgtgcctta ttcaactgca tacatagctc ctagcacagt gccttattcg 1201 gtaggcatct aagcaaattt cttaaattaa ttaatatatc tttaaagata tcatatttta 1261 tgtatgtagc ttattcaaag aagtgtttcc tatttctata tagtttatta tacatgatac 1321 ttgggtagct caacattctt aataaacagc ctttgtattc agaatataaa attgaaatag 1381 atatatataa agttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1441 aaaaaaaaaa aaaaa //