LOCUS BC029071 2788 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens chromosome 6 open reading frame 223, mRNA (cDNA clone
MGC:21868 IMAGE:4341806), complete cds.
ACCESSION BC029071
VERSION BC029071.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2788)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2788)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC029071.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: j Column: 8.
FEATURES Location/Qualifiers
source 1..2788
/db_xref="H-InvDB:HIT000050966"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21868 IMAGE:4341806"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2788
/gene="C6orf223"
/db_xref="GeneID:221416"
/db_xref="HGNC:HGNC:28692"
CDS 31..759
/gene="C6orf223"
/codon_start=1
/product="chromosome 6 open reading frame 223"
/protein_id="AAH29071.2"
/db_xref="GeneID:221416"
/db_xref="HGNC:HGNC:28692"
/translation="MMPLAEAGALAQGGGPSATEWACILRRKTPRHKQPTLLMVRASR
RSGKTSAVLKAGRQSVSGRKNSTSKDLVTLGASSLREERGHPLHPRHRKAVHLRTRGR
TRGWVQTLARMSRRTRGPVERAAAAAAAAAGGDAGHAPFPPPPAADGARAPRSPGQVT
PRGLRLRLPRRESLLRGLCRPLRPLLGFRESDSAKPASLRLLQHTPSARRNYRIAGAR
LMRSNYPPPLSSAALRGAGPTRRN"
BASE COUNT 532 a 868 c 833 g 555 t
ORIGIN
1 cggacgcgtg ggcggctgag gagtggggtg atgatgccac tggcagaagc aggcgccctg
61 gcccaaggag gaggcccttc agcaacggag tgggcctgca ttctgcggag gaagaccccc
121 aggcacaagc agcccacctt actgatggtc agagcatcca gaagaagtgg caagacttca
181 gctgtcctca aagcaggaag acagagtgtt tctggcagaa agaacagcac aagcaaagat
241 ctggtaaccc taggtgcctc cagtttgagg gaggagagag gacaccccct ccaccccaga
301 cataggaaag cagtccacct gcgcaccagg ggcaggacac gtggctgggt gcagacgctg
361 gcccggatgt cgcggaggac tcgcgggccg gtagagcgcg cggcggcggc ggcggcggcg
421 gcggcgggag gagacgcagg tcacgccccc ttcccaccac ctcccgccgc cgacggggcg
481 cgcgcgccga ggagcccggg acaggtgact cctagaggac tgcgtctgcg cctcccccgg
541 cgggagtccc ttcttcgcgg cctctgccgc cccctgcgtc ccctcctggg cttccgagag
601 tctgactcag ccaagccggc atcgcttcgc ctcctacaac acaccccgag cgcgagaaga
661 aattacagga ttgcaggggc acggctaatg cgctctaatt acccaccgcc gctgtcatcc
721 gcggcgctcc gcggcgctgg gccaacgcgc cgtaattaag acgccgctcc ccggtcccgg
781 aaccctccct tcgccaccct ccacccaccc acctcgcggt ccccaggacc actggctgcc
841 aactcctgcc gccctctggg actgcccctc agtcccagga gagctatgag gcctcactgg
901 gggcagaact tggggagacc gaagccggcc cttccactcc cctaaaccta cagtcctgga
961 aggtctctgc tggaagagac tgggagagtg gggaggggcc agggacctat ttcgttgaca
1021 gaaacagtga ggtctattgg aaagttagcc ttcagtggga ggagtggcaa aggcacgcag
1081 ggcagcagta cccccgtttg gcacttgagg cacggagaag ggaagggaag tccgcccagc
1141 cagaactccc agacccgctc gtttaacagt ggctttatga gcagcacgac ggactccctc
1201 ccctggcggg gaaattacct tcctgcgaag aaaggtgaca tccccgccac agacacggag
1261 gccccgcctg ctggccagct gtggccgcca taggggagct ggtgaggagt gaggtggctc
1321 tggcctccca tgtcaggtag ggtgagagag gccctgaaga tagaagccag gcccgaaggc
1381 cagaattaaa ggggtagctt ggccatcagc tccttccccc aaaaccaggc tcagagctct
1441 cctctatcag caattctttc ctgaggtcca gggtgttgca aactcatggc cttgggccac
1501 gttttacctt cagtgaggtt ttgtttggct tgcaatgagt acatgggttt taggttgaat
1561 gtgagagtct gcagacaatg tgggttctcc gactgccctc ccagtgaagg tggacctctg
1621 atttagaccg gcccgctggg cccgtgccta catccttttc ctcagcgtca ggatcttagt
1681 ccccatgatt gctgcccctt tgtggtctgc atgtttcttg gtaagggtgc ccagtcaagt
1741 gtctctggga gccccctctt ctctgtcatc gtcaggctcc ccacttgcag tggccgtggt
1801 ggctgcacat gctcccggat acccctccag cactcccttt tgtcatcttg agtttcagtc
1861 cgtgacttgg gtggcaccct atcttctcca tcagggatgg tagctatttt tctgccatga
1921 gactagaggt tgcttgagaa caggaaattg gatctctccc ttcaggctgg gatttcacta
1981 agggctggag aaggggggaa tatgggagga ttatctccta tcacagggag cgctctgagg
2041 gcaaggctgt gtctccgatt cagactgacg gttccctgag gatggggctg tttctcccct
2101 ccgactgggg ctccctgagg atggggctgt ttctcccctc cgactggggc tccctgagga
2161 cagggctgtg tctcccctca gcctggggct ccctgagtca gggctgtgtc tcccctcaga
2221 ctggggctcc ctgaggacgg ggctgtgtct gcctcagact gggaatccct gaagatgggg
2281 ccgtgtctcc ctcaaagtgg ggctccctca ggacagcgtt gtgtctcccc tcagactgcg
2341 gctccctgag gacggggctg tgtctccctc agactggggc tccctgaaga aagggctgct
2401 tctccctcag actggagctc cctgaagatg gggctgtgtc cccctcagac tggggctgcc
2461 tgaggacgag gctgcatctc ccctcagact ggagctccct gagggcaggg ctgtctcccc
2521 ccttcagact ggggcctccc ccaaaggaca gggactgtgt ctcccctggg actaggttct
2581 ttgtgtcttc tgcatcagac agattcccat gaggacaggg ctgtctcccc ctccatctgg
2641 agctccctga aggcaatggc ctctcccctc aaatgggaca tttgcacccc accccaccct
2701 ctggctcccc atggcgccca ggcattcctc ccaggacacc atttgtcacg ctttgatgaa
2761 tgaaacttac taaaaaaaaa aaaaaaaa
//