LOCUS BC029049 1953 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 55, member A, mRNA
(cDNA clone MGC:34290 IMAGE:5186472), complete cds.
ACCESSION BC029049
VERSION BC029049.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1953)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1953)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748690.
FEATURES Location/Qualifiers
source 1..1953
/db_xref="H-InvDB:HIT000040667"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34290 IMAGE:5186472"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1953
/gene="FAM55A"
/gene_synonym="MGC34290"
/db_xref="GeneID:120400"
/db_xref="HGNC:HGNC:28527"
CDS 418..1635
/gene="FAM55A"
/gene_synonym="MGC34290"
/codon_start=1
/product="family with sequence similarity 55, member A"
/protein_id="AAH29049.1"
/db_xref="GeneID:120400"
/db_xref="HGNC:HGNC:28527"
/translation="MSSPALTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPS
EGASALWRARNQGYDKIIFKGKFVNGTSHVFTECGLTLNSNAELCEYLDDRDQEAFYC
MKPQHMPCEALTYMTTRNREVSYLTDKENSLFHRSKVGVEMMKDRKHIDVTNCNKREK
IEETCQVGMKPPVPGGYTLQGKWITTFCNQVQLDTIKINGCLKGKLIYLLGDSTLRQW
IYYFPKVVKTLKFFDLHETGIFKKHLLLDAERHTQIQWKKHSYPFVTFQLYSLIDHDY
IPREIDRLSGDKNTAIVITFGQHFRPFPIDIFIRRAIGVQKAIERLFLRSPATKVIIK
TENIREMHIETERFVDFHGYIHYLIMKDIFKDLNVGIIDAWDMTIAYGTDTIHPPDHV
IGNQINMFLNYIC"
BASE COUNT 669 a 429 c 380 g 475 t
ORIGIN
1 gccagttaag aactcacagg tacttttcca gccacccaga taggagagat cattaaaaca
61 gtgcattctg tgctacctga cacctattgg ctttggtctg ctctaaactt atccatctct
121 gtccattact ggaacaactc cgcaaagtcc ttattcccta aaacatcact gataccatta
181 aagccactaa cagagactga actcagaata aaggaaatca tagagaaact agatcagcag
241 atcccaccca gacctttcac ccatgtgaac accaccacca gtgccacaca cagcacagcc
301 accatcctca accctcgaga tacatactgc aggggagacc agctggacat cctactggag
361 gtgagggacc acttgggaca gaggaagcaa tatggtgggg atttcctgag ggccaggatg
421 tcctccccag cactgacggc aggtgcttca ggaaaggtga tggacttcaa caatggcacc
481 tacctggtca gcttcactct gttctgggag ggccaggtct ccctgtctct gctgctcatc
541 caccccagtg aaggggcgtc ggctctctgg agggcaagga accaaggcta tgataaaatt
601 attttcaaag gcaaatttgt taatggcacc tctcatgtct tcactgaatg tggcctgacc
661 ctaaactcaa atgctgaact ctgtgaatat ctggatgaca gagaccaaga agccttctat
721 tgtatgaagc ctcaacacat gccctgtgag gctctgacct acatgaccac ccggaataga
781 gaggtatctt atcttacaga caaggaaaac agccttttcc acaggtccaa agtgggagtt
841 gaaatgatga aggatcgtaa acacattgat gtcactaatt gtaacaagag agaaaaaata
901 gaagagacat gccaagttgg aatgaagcct cctgtccctg gtggttatac tttacaagga
961 aaatggataa caacattttg caaccaggtt cagttagaca caattaagat aaatggctgt
1021 ttgaaaggca aactcattta cctcctggga gactctacac tacgtcagtg gatctactac
1081 ttccccaaag ttgtaaaaac actgaagttt tttgatcttc atgaaactgg aatctttaag
1141 aaacatttgc ttctggatgc agaaagacac actcagattc aatggaaaaa acatagctat
1201 cccttcgtca ctttccagct ctactctctg atagatcatg attatatccc tcgggaaatt
1261 gaccggctat caggtgacaa aaacacagcc atcgtcatca cctttggcca gcactttaga
1321 ccatttccca ttgacatttt tattcgcagg gccatcggtg ttcaaaaggc tattgaaaga
1381 ctgttcctaa gaagcccagc cactaaagtg attattaaga cagaaaacat cagggagatg
1441 cacatagaga cagagaggtt tgtagacttc catggttata ttcactatct tatcatgaag
1501 gatattttca aagacctcaa cgtgggcatc attgatgcct gggacatgac cattgcatat
1561 ggcactgaca ctatccaccc acctgatcat gtgattggaa atcagattaa catgttctta
1621 aactacattt gctaagggat aaatactata caaaatcact aggaaccaat ctctgcacat
1681 aatcccacat gtattgtaaa gtaagtttta ctcattttag gaactaagga aaataaattt
1741 aaaagaatct gtttggggag gaaggctatg taaggacaat gacaactgat aagggatgca
1801 aaaccaagag aatcattcat gaagaatgac tataccatgc ctggttctga tgctcgttta
1861 aaatattaaa aaagtttttt aaaagccaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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