LOCUS BC029041 2809 bp mRNA linear HUM 20-JUL-2004
DEFINITION Homo sapiens zinc finger and BTB domain containing 20, mRNA (cDNA
clone MGC:34359 IMAGE:5184140), complete cds.
ACCESSION BC029041
VERSION BC029041.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2809)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2809)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661651.
FEATURES Location/Qualifiers
source 1..2809
/db_xref="H-InvDB:HIT000040663"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34359 IMAGE:5184140"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2809
/gene="ZBTB20"
/gene_synonym="DKFZp566F123"
/gene_synonym="DPZF"
/gene_synonym="HOF"
/gene_synonym="ODA-8S"
/gene_synonym="ZNF288"
/db_xref="GeneID:26137"
/db_xref="MIM:606025"
CDS 441..2447
/gene="ZBTB20"
/gene_synonym="DKFZp566F123"
/gene_synonym="DPZF"
/gene_synonym="HOF"
/gene_synonym="ODA-8S"
/gene_synonym="ZNF288"
/codon_start=1
/product="ZBTB20 protein"
/protein_id="AAH29041.1"
/db_xref="GeneID:26137"
/db_xref="MIM:606025"
/translation="MTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRA
HRCVLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVLRVSQSEALQILT
AASILQIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQ
SHPQHSVDRIYSALYACSMQNGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRI
HERSQQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQRVQILE
RNESEECTEDTDQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGPGAARDSQAEPT
QPEQAAEAPAEGGPQTNQLETGASSPERSNEVEMDSTVITVSNSSDKSVLQQPSVNTS
IGQPLPSTQLYLRQTETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKP
FLFSLPQPLAGQQTQFVTVFQPGLSTFTAQLPAPQPLASSAGHSTASGQGEKKPYECT
LCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSIC
NKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHVALHSASNGTPPAGTPP
GARAGPPGVVACTEGTTYVCSVCPAKFDQIEQFNDHMRMHVSDG"
BASE COUNT 714 a 864 c 692 g 539 t
ORIGIN
1 gcagggagct taacagccag gcctggacac cctcaagaga ctgtgtgctg attctcagtc
61 gtcactcctt ggatcaggaa ccatagtcct gatctttgac catcagtctg tgacctgccc
121 cttctcttta catgcagccg ctctctgctc cctgccccaa tgaacatctg cactaggccc
181 aagccttgga gtaatttacc tgaagagtga caccattgat tttgaaacta ctgaagaaac
241 ccaagacagc tgaaaaccag aaggcatctg aggagaatga gattactcag ccgggtggat
301 ccagcgccaa gccgggcctt ccctgcctga actttgaagc tgttttgtct ccagacccag
361 ccctcatcca ctcaacacat tcactgacaa actctcacgc tcacaccggg tcatctgatt
421 gtgacatcag ttgcaagggg atgaccgagc gcattcacag catcaacctt cacaacttca
481 gcaattccgt gctcgagacc ctcaacgagc agcgcaaccg tggccacttc tgtgacgtaa
541 cggtgcgcat ccacgggagc atgctgcgcg cacaccgctg cgtgctggca gccggcagcc
601 ccttcttcca ggacaaactg ctgcttggct acagcgacat cgagatcccg tcggtggtgt
661 cagtgcagtc agtgcaaaag ctcattgact tcatgtacag cggcgtgcta cgggtctcgc
721 agtcggaagc tctgcagatc ctcacggccg ccagcatcct gcagatcaaa acagtcatcg
781 acgagtgcac gcgcatcgtg tcacagaacg tgggcgatgt gttcccgggg atccaggact
841 cgggccagga cacgccgcgg ggcactcccg agtcaggcac gtcaggccag agcagcgaca
901 cggagtcggg ctacctgcag agccacccac agcacagcgt ggacaggatc tactcggcac
961 tctacgcgtg ctccatgcag aatggcagcg gcgagcgctc tttttacagc ggcgcagtgg
1021 tcagccacca cgagactgcg ctcggcctgc cccgcgacca ccacatggaa gaccccagct
1081 ggatcacacg catccatgag cgctcgcagc agatggagcg ctacctgtcc accacccccg
1141 agaccacgca ctgccgcaag cagccccggc ctgtgcgcat ccagacccta gtgggcaaca
1201 tccacatcaa gcaggagatg gaggacgatt acgactacta cgggcagcaa agggtgcaga
1261 tcctggaacg caacgaatcc gaggagtgca cggaagacac agaccaggcc gagggcaccg
1321 agagtgagcc caaaggtgaa agcttcgact cgggcgtcag ctcctccata ggcaccgagc
1381 ctgactcggt ggagcagcag tttgggcctg gggcggcgcg ggacagccag gctgaaccca
1441 cccaacccga gcaggctgca gaagcccccg ctgagggtgg tccgcagaca aaccagctag
1501 aaacaggtgc ttcctctccg gagagaagca atgaagtgga gatggacagc actgttatca
1561 ctgtcagcaa cagctccgac aagagcgtcc tacaacagcc ttcggtcaac acgtccatcg
1621 ggcagccatt gccaagtacc cagctctact tacgccagac agaaaccctc accagcaacc
1681 tgaggatgcc tctgaccttg accagcaaca cgcaggtcat tggcacagct ggcaacacct
1741 acctgccagc cctcttcact acccagcccg cgggcagtgg ccccaagcct ttcctcttca
1801 gcctgccaca gcccctggca ggccagcaga cccagtttgt gacagtgttc cagcccggtc
1861 tgtcgacctt tactgcacag ctgccagcgc cacagcccct ggcctcatcc gcaggccaca
1921 gcacagccag tgggcaaggc gaaaaaaagc cttatgagtg cactctctgc aacaagactt
1981 tcaccgccaa acagaactac gtcaagcaca tgttcgtaca cacaggtgag aagccccacc
2041 aatgcagcat ctgttggcgc tccttctcct taaaggatta ccttatcaag cacatggtga
2101 cacacacagg agtgagggca taccagtgta gtatctgcaa caagcgcttc acccagaaga
2161 gctccctcaa cgtgcacatg cgcctccacc ggggagagaa gtcctacgag tgctacatct
2221 gcaaaaagaa gttctctcac aagaccctcc tggagcgaca cgtggccctg cacagtgcca
2281 gcaatgggac cccccctgca ggcacacccc caggtgcccg cgctggcccc ccaggcgtgg
2341 tggcctgcac ggaggggacc acttacgtct gctccgtctg cccagcaaag tttgaccaaa
2401 tcgagcagtt caacgaccac atgaggatgc atgtgtctga cggataagta gtatctttct
2461 ctctttctta tgaacaaaac aaaacaacaa caaaaaacaa acaaacaaaa aagctatggc
2521 actagaattt aagaaatgtt ttggtttcat ttttactttc tgtttttgtt tttgtttcgt
2581 ttcattttgt actacatgaa gaactgtttt ttgcctgctg gtacattaca tttccggagg
2641 cttgggtgaa taatagtttt cccagtctcc ctcggatggt ggccttaagg cctggtagtg
2701 cttcaagagg tccactggtt ggatctctag ctactggcct ctaaatacaa cccttcttta
2761 caaaaaaatc ttttaaaaaa aagtaaaaaa aaaaaaaaaa aaaaaaaaa
//