LOCUS BC028740 2038 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens signal transducing adaptor molecule (SH3 domain and
ITAM motif) 2, mRNA (cDNA clone MGC:33781 IMAGE:5260998), complete
cds.
ACCESSION BC028740
VERSION BC028740.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2038)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2038)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028740.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21265030.
FEATURES Location/Qualifiers
source 1..2038
/db_xref="H-InvDB:HIT000040635"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33781 IMAGE:5260998"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2038
/gene="STAM2"
/gene_synonym="DKFZp564C047"
/gene_synonym="Hbp"
/gene_synonym="STAM2A"
/gene_synonym="STAM2B"
/db_xref="GeneID:10254"
/db_xref="HGNC:HGNC:11358"
/db_xref="MIM:606244"
CDS 351..1928
/gene="STAM2"
/gene_synonym="DKFZp564C047"
/gene_synonym="Hbp"
/gene_synonym="STAM2A"
/gene_synonym="STAM2B"
/codon_start=1
/product="signal transducing adaptor molecule (SH3 domain
and ITAM motif) 2"
/protein_id="AAH28740.1"
/db_xref="GeneID:10254"
/db_xref="HGNC:HGNC:11358"
/db_xref="MIM:606244"
/translation="MPLFTANPFEQDVEKATNEYNTTEDWSLIMDICDKVGSTPNGAK
DCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAH
PKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQTVSAAAKNGTS
SNKNKEDEDIAKAIELSLQEQKQQHTETKSLYPSSEIQLNNKVARKVRALYDFEAVED
NELTFKHGEIIIVLDDSDANWWKGENHRGIGLFPSNFVTTNLNIETEAAAVDKLNVID
DDVEEIKKSEPEPVYIDEDKMDRALQVLQSIDPTDSKPDSQDLLDLEDICQQMGPMID
EKLEEIDRKHSELSELNVKVLEALELYNKLVNEAPVYSVYSKLHPPAHYPPASSGVPM
QTYPVQSHGGNYMGQSIHQVTVAQSYSLGPDQIGPLRSLPPNVNSSVTAQPAQTSYLS
TGQDTVSNPTYMNQNSNLQSATGTTAYTQQMGMSVDMSSYQNTTSNLPQLAGFPVTVP
AHPVAQQHTNYHQQPLL"
BASE COUNT 644 a 431 c 482 g 481 t
ORIGIN
1 gaaggtcccc ggcttcgtgg ctagccgggg tcctagcgct ggaaaggtgg ccgtagcggc
61 cgcctgaccc atacaaaagt ctgggacagg ggcagcgaca aaggccttgg gaggacgccc
121 atggtcggag ggatctcgcc ccgggagaaa agttgggaca ggagcgcggg atcgaagggt
181 ggactccgag ccggcctgtc aggcaagagc cgggcaggtg cggtggcgga agtgcaggga
241 cggaggccga agcggagcgg tctagggagc cgcggccgcg ggtcacccgg cgggtagcag
301 ttgctgagtg tcagctagac agcagcgact agggctcggg cgccggcgag atgcctttgt
361 tcaccgccaa ccccttcgag caagacgtgg aaaaagccac gaatgagtac aacactacag
421 aagattggag tcttattatg gacatatgtg acaaagttgg aagtactcct aatggagcga
481 aagattgcct aaaagccata atgaaaaggg taaatcataa ggttccacat gttgctctgc
541 aagcactaac tcttcttggg gcttgtgtgg caaactgtgg aaagatattt catttagaag
601 tatgttcccg tgattttgca acagaagtac gtgctgtgat taaaaataag gcacatccta
661 aagtatgtga aaaactgaaa tctttaatgg tggagtggtc agaagaattt cagaaggacc
721 ctcagtttag tctgatatct gcaactatta aatctatgaa agaagaagga attacttttc
781 ctccagcagg ttctcagact gtctcagctg ctgccaagaa tggtacgtca tcgaacaaaa
841 acaaagagga tgaagacata gctaaagcta ttgaattatc gctgcaagaa cagaaacagc
901 aacacacaga aacaaaatcc ttatatccat cttcagaaat tcagttaaat aataaggttg
961 cacggaaagt gagagcttta tatgattttg aagctgttga ggacaatgaa ctcaccttta
1021 aacatggtga aataattatt gttttggatg acagtgatgc caattggtgg aaaggagaaa
1081 atcacagagg aataggactt ttcccatcca attttgtaac aactaattta aacatagaga
1141 ctgaggcagc ggctgtggac aaattgaatg taattgatga tgatgtggag gaaattaaga
1201 aatcagagcc tgagcctgtt tatatagatg aggataagat ggatagagcc ctgcaggtac
1261 ttcagagtat agatccaaca gattcaaaac cagactccca agaccttttg gatttagaag
1321 atatctgcca acagatgggt ccaatgatag atgaaaaact tgaagaaatt gataggaagc
1381 attcagaatt gtctgaattg aatgttaaag tcctggaagc tctggaacta tataacaaat
1441 tggtgaatga agcaccagtg tactcagtct attcaaagct ccaccctcca gcacattacc
1501 cacctgcatc atctggggtt ccaatgcaga catatccagt tcaatcacat ggtggaaact
1561 atatgggtca gagcattcac caagtaactg ttgcccaaag ctatagccta ggacccgatc
1621 aaattggtcc actgagatct ctgcctccaa atgtgaattc ctcagtgaca gcacagcctg
1681 ctcaaacttc atatttaagc actggacaag acactgtttc caatcctact tatatgaacc
1741 agaactctaa cctacagtca gctactggta caactgctta cacacagcaa atggggatgt
1801 ctgtggatat gtcatcttat cagaacacta cttccaattt gcctcaactg gcaggctttc
1861 cggtgacagt tccagctcat ccagttgcac agcagcacac aaattaccat cagcagcctc
1921 tcctttagaa acaaatcaag cattttcttg aaagccttca taagtgtatt attcagtcct
1981 tgtgatacca acctgaaaat attaaaactt ttttccctcc caaaaaaaaa aaaaaaaa
//