LOCUS BC028739 1915 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens potassium channel, subfamily V, member 1, mRNA (cDNA
clone MGC:33756 IMAGE:5261372), complete cds.
ACCESSION BC028739
VERSION BC028739.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1915)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1915)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028739.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: f Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28329444.
FEATURES Location/Qualifiers
source 1..1915
/db_xref="H-InvDB:HIT000040634"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33756 IMAGE:5261372"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1915
/gene="KCNV1"
/gene_synonym="HNKA"
/gene_synonym="KCNB3"
/gene_synonym="KV2.3"
/gene_synonym="KV8.1"
/db_xref="GeneID:27012"
/db_xref="HGNC:HGNC:18861"
/db_xref="MIM:608164"
CDS 308..1810
/gene="KCNV1"
/gene_synonym="HNKA"
/gene_synonym="KCNB3"
/gene_synonym="KV2.3"
/gene_synonym="KV8.1"
/codon_start=1
/product="potassium channel, subfamily V, member 1"
/protein_id="AAH28739.1"
/db_xref="GeneID:27012"
/db_xref="HGNC:HGNC:18861"
/db_xref="MIM:608164"
/translation="MPSSGRALLDSPLDSGSLTSLGSSVFCSEGEGEPLALGDCFTVN
VGGSRFVLSQQALSCFPHTRLGKLAVVVASYRRPGALAAVPSPLELCDDANPVDNEYF
FDRSSQAFRYVLHYYRTGRLHVMEQLCALSFLQEIQYWGIDELSIDSCCRDRYFRRKE
LSETLDFKKDTEDQESQHESEQDFSQGPCPTVRQKLWNILEKPGSSTAARIFGVISII
FVVVSIINMALMSAELSWLDLQLLEILEYVCISWFTGEFVLRFLCVRDRCRFLRKVPN
IIDLLAILPFYITLLVESLSGSQTTQELENVGRIVQVLRLLRALRMLKLGRHSTGLRS
LGMTITQCYEEVGLLLLFLSVGISIFSTVEYFAEQSIPDTTFTSVPCAWWWATTSMTT
VGYGDIRPDTTTGKIVAFMCILSGILVLALPIAIINDRFSACYFTLKLKEAAVRQREA
LKKLTKNIATDSYISVNLRDVYARSIMEMLRLKGRERASTRSSGGDDFWF"
BASE COUNT 428 a 524 c 518 g 445 t
ORIGIN
1 agtgtgcaca gggactgtgt cgggcttgga cctcacctga tcctctctct tagcgcgacc
61 cttcctctgc tccctgtctc ctctttctgc cacttgtgcg ctgcttccgc gcactcccgg
121 ttccctagcg gcaggaggag gaaggcgcac agcgggtgga gagggtgcgc caaggagagg
181 taaccccttc gggagcccag ggaatcccgg ccgccaccag gggccgtgcc accgccctcg
241 cgggaccaaa gcttccggcg tgtccccaac tttgtggcgc cctcaggccg cggcgactgg
301 gttagagatg ccttccagcg gcagagcgct gctggactcg ccgctggaca gcggctccct
361 gacctccctg ggctctagtg tcttctgcag cgagggtgaa ggggagccct tggcgctcgg
421 ggactgcttc acggtcaacg tgggcggcag ccgcttcgtg ctctcgcagc aggcgctgtc
481 ctgcttcccg cacacgcgcc ttggcaagct ggccgtggtg gtggcttcct accgccgccc
541 cggggccctg gccgccgtgc ccagccctct ggagctttgc gacgatgcca accccgtgga
601 caacgagtac ttcttcgacc gcagctcgca ggcgttccga tatgtcctgc actactaccg
661 caccggccgc ctgcatgtca tggagcagct gtgcgcgctc tccttcctgc aggagatcca
721 gtactggggc atcgatgagc tcagcatcga ttcctgctgc agggacagat acttcagaag
781 gaaagagctg agtgaaactt tagacttcaa gaaggacaca gaagaccagg aaagtcaaca
841 tgagagtgaa caggacttct cccaaggacc ttgtcccact gttcgccaga agctctggaa
901 tatcctggag aaacctggat cttccacagc tgcccgtatc tttggcgtca tctccattat
961 cttcgtggtg gtgtccatca ttaacatggc cctgatgtca gctgagttaa gctggctgga
1021 cctgcagctg ctggaaatcc tggagtatgt gtgcattagc tggttcaccg gggagtttgt
1081 cctccgcttc ctgtgtgtgc gggacaggtg tcgcttccta agaaaggtgc caaacatcat
1141 agacctcctt gccatcttgc ccttctacat cactcttctg gtagagagcc taagtgggag
1201 ccagaccacg caggagctgg agaacgtggg gcgcattgtc caggtgttga ggctgctcag
1261 ggctctgcgc atgctaaagc tgggcagaca ttccacagga ttacgctccc ttgggatgac
1321 aatcacccag tgttacgaag aagtcggcct actgctccta tttctatccg tgggaatctc
1381 tatattttca actgtagaat actttgctga gcaaagcatt cctgacacaa ccttcacaag
1441 tgtcccttgt gcatggtggt gggccaccac ctctatgact actgtgggat atggggacat
1501 tagaccagac accaccacag gcaaaatcgt ggccttcatg tgtatattat cgggaattct
1561 tgtcttggcc ttgcctattg ctattattaa cgatcgcttc tctgcttgct acttcacctt
1621 gaaactcaag gaagcagctg ttagacagcg tgaagcccta aagaagctta ccaagaatat
1681 agccactgac tcatatatca gtgttaactt gagagatgtc tatgcccgga gtatcatgga
1741 gatgctgcga ctgaaaggca gagaaagagc aagtactagg agcagcgggg gagatgattt
1801 ctggttttga attaattttc aatttattta caaaagctat gtacaattaa ctaaaatgat
1861 aaagcagtga tgtggatttc tgtaaaaaaa aaaaaagaaa aaaaaaaaaa aaaaa
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