LOCUS BC028726 3954 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens glycerol-3-phosphate dehydrogenase 1-like, mRNA (cDNA
clone MGC:33332 IMAGE:4820730), complete cds.
ACCESSION BC028726
VERSION BC028726.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3954)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3954)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028726.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: h Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222096.
FEATURES Location/Qualifiers
source 1..3954
/db_xref="H-InvDB:HIT000040629"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33332 IMAGE:4820730"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3954
/gene="GPD1L"
/gene_synonym="KIAA0089"
/db_xref="GeneID:23171"
/db_xref="HGNC:HGNC:28956"
CDS 61..1116
/gene="GPD1L"
/gene_synonym="KIAA0089"
/codon_start=1
/product="glycerol-3-phosphate dehydrogenase 1-like"
/protein_id="AAH28726.1"
/db_xref="GeneID:23171"
/db_xref="HGNC:HGNC:28956"
/translation="MAAAPLKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFE
ETVNGRKLTDIINNDHENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHR
ICDEITGRVPKKALGITLIKGIDEGPEGLKLISDIIREKMGIDISVLMGANIANEVAA
EKFCETTIGSKVMENGLLFKELLQTPNFRITVVDDADTVELCGALKNIVAVGAGFCDG
LRCGDNTKAAVIRLGLMEMIAFARIFCKGQVSTATFLESCGVADLITTCYGGRNRRVA
EAFARTGKTIEELEKEMLNGQKLQGPQTSAEVYRILKQKGLLDKFPLFTAVYQICYES
RPVQEMLSCLQSHPEHT"
BASE COUNT 1102 a 785 c 902 g 1165 t
ORIGIN
1 agggggaggt gggcagccgg ccagggaagc acggtccagg cggctacatt cggcccggcc
61 atggcagcgg cgcccctgaa agtgtgcatc gtgggctcgg ggaactgggg ttcagctgtt
121 gcaaaaataa ttggtaataa tgtcaagaaa cttcagaaat ttgcctccac agtcaagatg
181 tgggtctttg aagaaacagt gaatggcaga aaactgacag acatcataaa taatgaccat
241 gaaaatgtaa aatatcttcc tggacacaag ctgccagaaa atgtggttgc catgtcaaat
301 cttagcgagg ctgtgcagga tgcagacctg ctggtgtttg tcattcccca ccagttcatt
361 cacagaatct gtgatgagat cactgggaga gtgcccaaga aagcgctggg aatcaccctc
421 atcaagggca tagacgaggg ccccgagggg ctgaagctca tttctgacat catccgtgag
481 aagatgggta ttgacatcag tgtgctgatg ggagccaaca ttgccaatga ggtggctgca
541 gagaagttct gtgagaccac catcggcagc aaagtaatgg agaacggcct tctcttcaaa
601 gaacttctgc agactccaaa ttttcgaatt accgtggttg atgatgcaga cactgttgaa
661 ctatgtggtg cgcttaagaa catcgtagct gtgggagctg ggttctgcga cggcctccgc
721 tgtggagaca acaccaaagc ggccgtcatc cgcctgggac tcatggaaat gattgctttt
781 gccaggatct tctgcaaagg ccaagtgtct acagccacct tcctagagag ctgcggggtg
841 gccgacctga tcaccacctg ttacggaggg cggaaccgca gggtggccga ggccttcgcc
901 agaactggga agaccattga agagttggag aaggagatgc tgaatgggca aaagctccaa
961 ggaccgcaga cttctgctga agtgtaccgc atcctcaaac agaagggact actggacaag
1021 tttccattgt ttactgcagt gtatcagatc tgctacgaaa gcagaccagt tcaagagatg
1081 ttgtcttgtc ttcagagcca tccagagcat acataaagtg aatcatgcaa cgtgttgggg
1141 gaagttctgc ctttctgatc aatcttttgg gttcacgtgg aaaccaggac ttggcaacat
1201 gatgtttgac tgtaatctca tcacggatat gtatgaattt ttacaggttc gtttttgaat
1261 tgtgagaggc agttcattag caaagatgta ctgggcagta actaaacaca catgcaaaca
1321 tgtgaatggt ggtttattcc tcattctgtg gatgtttcta tgagccaaaa tttgatgtct
1381 ttttttcaaa attgcttatg aaatttccac acaatcgtag cttataagat tggaacgatc
1441 tcagccaaat attttaggtg taattcatat gtatttgagt ggaggatttt ttttctcatt
1501 tttctagtgt taaattttaa ccagcattaa catggtagag tggaggagtg agtgtgttca
1561 aagatcaaca tatttaactt ttaaacacta tctcaaagcc agcataatta actactttga
1621 ttgtgggctg acctttgttt ttttaacaat caggcatttt taattagata atccactcat
1681 gtatttcccc ctcactgcag ttgtctgcat ttttagcctc ttttctcttc gttagttgtc
1741 agaatatgcc ttcgtcaagg ctcagaggta acaagacaga aaattcatct gggattttcc
1801 tgctgtggct ggcacattct tctgattaac agacacttgt atgatgcttt aggctagtta
1861 gtgcattttt tagcaaacat ttatcttaaa catcacagat ccactggggg gtgcaagggg
1921 ctactgttag tcctcttgtt agatgcagtc actcctcctg gtcacctagt gagcagggac
1981 agagccagga gtcaagtgca gtgccaaggt gcatgaccct ctgagaagtc actgggctga
2041 tttgacctcc gactcattgg ttgtgcaaat gccatgtgca gcctttcctg aggccatagg
2101 agggcttcct gcagctgaga tctatgcagg ccatcctctc aacaagtgcc actccaaggg
2161 cggtcctcgg tgcagcagca tcagcttcac ttgtgggggg gtgggggaag gggcggtctc
2221 agaaatgcag gttcccaggt cccaccctgg acttctgaag gggtgtggca tctgtgtttc
2281 tgatgcttac tacaatatgt gaaccactac tttagaaaat ctgctttaac ttggtattcc
2341 tctaattgtg ttccctagga aatgactgtc ccaagagcca gtgattattc caggtgttcc
2401 ctggaaaggt caagtgagtc tgggaaacac tatgtctgta cacctcttga aggtgtcgaa
2461 tgtatgttta tacatcagtg gaacccattt ttctagccta gcaagtccca aacacattac
2521 actgaagaga ttttggtgag gaaacttgct ggagttttca gggaacactg ttctaggctt
2581 aggtgacctt aggatcactc aagtagacgc ttcactccct gcgagaaatt aggatgaata
2641 actacctgtg gcattgttgg ttctgaactt ttacagttca ggcctgctgt gaatctttga
2701 tgaagcttta aggtgacact gttgtacaag atgtcagctt tgctgaaacg cacattacct
2761 ggaataagtg ctttaattgt agaattagaa tgggatttac tgtactgttt taaatgagat
2821 tggcttcaga atccattaca gttaccttac atagcacttg atacgtgtta aatgaacata
2881 tgaatgtaat ttatatattc ctagaattta agttactttg tgagatttgg gcctgtccct
2941 caatgccagt ttaggatttc tttttttcta taccttgaaa tgattataaa atagattttc
3001 atgggaattt taaaaactct atccaaaaca tttttggagc attttaaagc cccatacaca
3061 gaagtatacg aaagcacaca aaacactcca agtttcagca gttttagcgc caccattaac
3121 ccactttgct tgtctcatga aaaatctttg ttaaagtttg tacacaggta acaaaaagtt
3181 actttaaaag atatataaag ggctgtaagc taattgtggt gtctagtaag tagcataatg
3241 agatgtgagg agttggaact ttgcgtgttt tgcgtatttt catctgcatt cagcttctta
3301 ctctgggttt gtactcgagt gttatttctt tacaaatgcc cttgtaatta ccactctgaa
3361 gtctgctgac tgtgtctctt gaacatactt aggatattct gcacattatg gaaaaaggta
3421 aattttagaa gtttctgctc tactaactgt agatatttat gactctgcga gttatctatt
3481 tttataacca cctgtggtcc attgttcatt ttaattcaca tttcttatga agtatggtaa
3541 cagggaggga gacacctaga ttagcagctc aatttgtact acttcagcca atctgtgaat
3601 gtaaaaacta cactgttgcc ttgctaggat ccaccctcct ataatatgga acaaatatct
3661 gaatgaaatc caccctagga gacggagtca aactaaactt gtggtttttc atttaacttt
3721 tgactacagc atggccccat ggcatccaca ccaagagggt gttgtgatga ggtgccggtg
3781 tgcaaaggga actttagttt ttccactggt tcttatctgc tagcctttta catacatgtg
3841 tactatattt gtttatagac tgtaggtgga tatataattt aaaagcttga tttaataaac
3901 atttaacccc ataaaaaaaa aaaaaaaaaa aaaaaaagaa aaaaaaaaaa aaaa
//