LOCUS BC028721 1789 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6, mRNA (cDNA clone MGC:33092 IMAGE:5269300), complete cds. ACCESSION BC028721 VERSION BC028721.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1789) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1789) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC028721.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: o Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4827011. FEATURES Location/Qualifiers source 1..1789 /db_xref="H-InvDB:HIT000040625" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33092 IMAGE:5269300" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1789 /gene="SLC1A6" /gene_synonym="EAAT4" /db_xref="GeneID:6511" /db_xref="MIM:600637" CDS 153..1091 /gene="SLC1A6" /gene_synonym="EAAT4" /codon_start=1 /product="SLC1A6 protein" /protein_id="AAH28721.1" /db_xref="GeneID:6511" /db_xref="MIM:600637" /translation="MSSHGNSLFLRESGQRLGRVGWLQRLQESLQQRALRTRLRLQTM TLEHVLRFLRRNAFILLTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQM LVLPLIVSSLVTGMASLDNKATGRMGMRAAVYYMVTTIIAVFIGILMVTIIHPGKGSK EGLHREGRIETIPTADAFMDLIRNMFPPNLVEACFKQFKTQYSTRVVTRTMVRTENGS EPGASMPPPFSVENGTSFLENVTRALGTLQEMLSFEETVPVPGSANGINALGLVVFSV AFGLVIGGMKHKGRVLRDFFDSLNEAIMRLVGIIIW" BASE COUNT 366 a 491 c 444 g 488 t ORIGIN 1 ggtccggtcc ccgcgccggt gctgcacagt ccctggcggg tccccgcggc cccggccggg 61 cgcttcgccg ggctccggct cctgcatccg ggcgcagcgc gcaggccgag gcgcgggcag 121 gccgcccccg ccgctccgga cgccgataga ccatgagcag ccatggcaac agcctgttcc 181 tgcgggagag cggccagcgg ctgggccggg tgggctggct gcagcggctg caggaaagcc 241 tgcagcagag agcactgcgc acgcgcctgc gcctgcagac catgaccctc gagcacgtgc 301 tgcgcttcct gcgccgaaac gccttcattc tgctgacggt cagcgccgtg gtcattgggg 361 tcagcctggc ctttgccctg cgcccatatc agctcaccta ccgccagatc aagtacttct 421 cttttcctgg agagcttctg atgaggatgc tgcagatgct ggtgttacct ctcattgtct 481 ccagcctggt cacaggtatg gcatccctgg acaacaaggc cacggggcgg atggggatgc 541 gggcagctgt gtactacatg gtgaccacca tcatcgcggt cttcatcggc atcctcatgg 601 tcaccatcat ccatcccggg aagggctcca aggaggggct gcaccgggag ggccggatcg 661 agaccatccc cacagctgat gccttcatgg acctgatcag aaatatgttt ccaccaaacc 721 ttgtggaggc ctgcttcaaa cagttcaaga cgcagtacag cacgagggtg gtaaccagga 781 ccatggtgag gacagagaac gggtctgagc cgggtgcctc catgcctcct ccattctcag 841 tggagaacgg aaccagcttc ctggaaaatg tcactcgggc cttgggtacc ctgcaggaga 901 tgctgagctt tgaggagact gtacccgtgc ctggctccgc caatggcatc aacgccctgg 961 gcctcgtggt cttctctgtg gcctttgggc tggtcattgg tggcatgaaa cacaagggca 1021 gagtcctcag ggacttcttc gacagcctca atgaggctat tatgaggctg gtgggcatca 1081 ttatctggtg agtcctggtc tgtgcccacg ggatggtgga gccagagctg ggaagtcagg 1141 ctgtggggaa gctgccgaag ggcttgctgg ggacttttgg tcattcattt acgtattggg 1201 tgattcactt acccactcac caactcattc attcatgtct ttctgggatg atttcatcac 1261 tagttgactt ccttgttcat ctgttcattc attcattctt ctatgcattg gttagttcat 1321 ggaatatctc actctttcat tcattcatgt ccttctgcaa tgattcattc actgctttgt 1381 tcatctgttc attcactcat tcttctatgc attgatgaaa tcactcattc agtgatttat 1441 tcatctatac tcatgcttca atgcattgat ttactcattt cctcatgcat ttattcattc 1501 atctatgcat tggttaaatc actggccaac tcactaactc attcattcat tcacactttt 1561 ctgcaatgat ttgttcactt gttcactccc ttgcttatct gttcattcac tcattcttca 1621 atacattgac caagccattc actgacattt attcagctac atttattctt tcatgcattg 1681 gtttctggat ttatttggtc attcatttat ttattttgca aaattaatgt atttttaatt 1741 gacaaataaa aactgtatat attttcatgt gcaacaaaaa aaaaaaaaa //