LOCUS BC028713 4299 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens PDLIM1 interacting kinase 1 like, mRNA (cDNA clone
MGC:27093 IMAGE:4828997), complete cds.
ACCESSION BC028713
VERSION BC028713.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4299)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4299)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22779869.
FEATURES Location/Qualifiers
source 1..4299
/db_xref="H-InvDB:HIT000040619"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27093 IMAGE:4828997"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4299
/gene="PDIK1L"
/gene_synonym="CLIK1L"
/gene_synonym="RP11-96L14.4"
/db_xref="GeneID:149420"
/db_xref="HGNC:HGNC:18981"
CDS 290..1315
/gene="PDIK1L"
/gene_synonym="CLIK1L"
/gene_synonym="RP11-96L14.4"
/codon_start=1
/product="PDLIM1 interacting kinase 1 like"
/protein_id="AAH28713.1"
/db_xref="GeneID:149420"
/db_xref="HGNC:HGNC:18981"
/translation="MVSSQPKYDLIREVGRGSYGVVYEAVIRKTSARVAVKKIRCHAP
ENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMSHGSNSSLYLQLVETSLK
GEIAFDPRSAYYLWFVMDFCDGGDMNEYLLSRKPNRKTNTSFMLQLSSALAFLHKNQI
IHRDLKPDNILISQTRLDTSDLEPTLKVADFGLSKVCSASGQNPEEPVSVNKCFLSTA
CGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFIDTETKKELLGSYVKQGTEI
VPVGEALLENPKMELLIPVKKKSMNGRMKQLIKEMLAANPQDRPDAFELELRLVQIAF
KDSSWET"
BASE COUNT 1353 a 703 c 881 g 1362 t
ORIGIN
1 agcggagcga aggcgcgagc tgcccgataa tggcggcctg cagagcccat gagagggaga
61 agcggcagcg tctaccctga ggaaggtgct cttccccatg gggactgtac caggctggag
121 aggacatggc actgcttcag agacacgaac caccttgagt ggatgtgatt ggcgatcccc
181 gtagagcagg aaagctcgtc tgctgtgcag ccggcgcaga ggattctgtg gcaggaaatt
241 agacactagg aaattcagta gcgatttgaa ggaaacctcg accttgaaga tggtgagtag
301 ccagccaaag tacgatctaa tacgggaggt aggccgaggt agttacggtg ttgtgtatga
361 agcagtcatc agaaagacct ctgcacgggt ggcagtgaag aaaattcgat gtcacgcacc
421 tgaaaatgtt gaactagccc ttcgtgagtt ctgggcacta agcagtatca agagccaaca
481 tccaaatgtg attcacttgg aggaatgcat cctacaaaag gatgggatgg tgcaaaagat
541 gtcccacggc tctaattctt ccctttattt acagcttgta gaaacttcat taaaaggaga
601 aattgccttt gatcccagaa gcgcctatta tttgtggttt gtgatggatt tttgtgacgg
661 aggagatatg aatgagtatc tgttgtccag gaaacccaat cgtaaaacta acaccagctt
721 catgcttcag ctgagcagtg ccctggcttt cttgcataaa aaccagatca tccaccgaga
781 tcttaagcct gataacatcc tgatttctca aaccaggttg gataccagtg acttggaacc
841 taccctcaag gtggctgatt ttggtctaag taaagtttgt tcagcctctg ggcagaaccc
901 agaagaacct gtcagtgtaa acaagtgttt cctttccaca gcatgtggaa cagattttta
961 catggctcct gaagtttggg aaggacatta cacagcaaaa gctgacatct ttgctctggg
1021 gattatcatc tgggcaatgc tggaaaggat cacattcata gacacagaga caaagaagga
1081 actcttgggg agttatgtaa aacaaggaac tgagattgtg cctgttgggg aggcacttct
1141 ggaaaatccc aaaatggaac ttctcattcc tgtgaagaaa aaatctatga atgggcgaat
1201 gaaacaactg attaaggaaa tgctggctgc aaaccctcag gatcgtccag atgcttttga
1261 actagaactc agattagtac aaattgcatt taaagatagc agctgggaaa cgtgacacat
1321 attatttgca aataccatgg atgatatgct gcttctgttt aacagtgatg caacattatg
1381 tggctgaaaa agaatataaa aagctagact ctaccctcta agggtttaga ttttttgtgg
1441 gatttttttt tttcctcatt tttcttaaat ccaagttggc cgttttatta gtatgtttca
1501 aatgtgtatt accaatgtgg gtgtaaattt ttaaaaaatg attattgata gaagtttggc
1561 aggaaaattc tttaagagct aacaagagaa gagagtccag ttttctggaa atatgtcttt
1621 aagtatttta gacattcctc gtcagtatta ggaatttcca tgggaaaaga ggtttgcatg
1681 ctggtaatgc aacctttgaa actttgtaaa ggaaacatat atgtatatat ttatgtatat
1741 gtaagtatgt gaatgtgcgc attttgcatt ccatatgaaa aaaatgccac gtctgtttaa
1801 attatttgat gtaggtttgg gtttttgaga tttgctggtg aagtcagtga cgaaaaataa
1861 accttccctt atcttcctac tctgcccctc cccctaatga aatcatatta agttgttttt
1921 ttttttttgt aatatacagc ttttttttta aggcatcatt ttcgagggtc taaaattatc
1981 tggtaaaaca aatgaaatta agtgatccaa agctgctgaa gtatgtttga actctccagt
2041 gccctatagc tgcaagagtt gaattagtca tgcagtcata tggcagcagg ttggtgattc
2101 agtccgacct tctttaggta accgagcatt tatttaacca actataccac tgcattggga
2161 cgtctgcact tgagcttcta caatctgata taaatctgaa tacaggatta ttctgtttga
2221 aaactttgct atgtgtgaac tgtaatactt gatacatttt tggtttgaag actttgtcta
2281 agcctcatta tactgaagtt gaagaaacca aatgagctcc accctcactt tgcctgccct
2341 gatatgatca cttgttgagt cactggagtt cctttcattt tggcactgat gctgttttct
2401 cttgtctgat ttgaaacagt actggtaata atatggttgt tgaaaatgtg atcaccttta
2461 tctaaagtgg gagaagatac atacacagta tggcaaatgg ataaaatatt gtggcatcaa
2521 ctacttttaa agtagaaaag ctatccattt tatacaatca ctgatacagt ctatgtcaaa
2581 aaaccaacag accattattc ctcttgaagt tagtttgatt ttatctttgt atggttgtct
2641 acaatttgtt ttcctgtaaa tgcagatagt taaaatctaa aggatagaat gctttcctaa
2701 aacagaacat tagcctttaa ggttaaatag actttacatt gtatctaagt taatctttat
2761 aaagcactag aatttttggt caaaagtcaa aatagtatta gaatattgaa attattgata
2821 gctttcataa tctcagcttt tttgaacttc cacaattttt ggaatatgtc ataatttttt
2881 tccctgtttc aaatgtgttc agaggaaata gaatgtaaaa catcacaaaa aaaattgcag
2941 tacataaaat ttctggacta tgttagttac ttgatctgga agtttaaaat ttggactaaa
3001 aggttttatt gaaataaagc ctcttaaaat gaaaaatcat atacttttaa catcactttt
3061 aagctaataa atataagaat tcttttggaa attagaggtg gaaacacact ggaacctcat
3121 gataattgac cctctggatc accagattag tttaatttaa cagatatgtc caaggaagtt
3181 gagctatagg gagtaagaaa aagcatcatg ataacgtcta gtcaataaca tggcacttca
3241 gcagagattc atagatgatg gtatgcccat gcatcatttg ctcttcaaat atctatgtgc
3301 ttggagccac agtttcctaa gcgcatagtt tttggtcctg cctcatgtaa aatagttaat
3361 gattatcatt tacttggaaa gattttacct gtgaagtgaa attctttcat tgggggtaag
3421 ggtatgaggt gatcaggaag tttcttctgg aattttatca agtccttgta ttctaaaata
3481 gccaagcaaa atgatagtaa attctttgtc tttgttcttt cagtcagagg tatttattaa
3541 gtacctactg tgtgctcagc actaaaggtt tgttgataaa atgacaatta aaaaatggca
3601 tttagccaaa ggccttttca gccaggagta agaaaagatg gttagtgata tttggaaata
3661 cctggatatt tgctagagga aaaatgaaag caaaacttcg tacacagtgc cttgcccata
3721 ataggtactc aataagcaat tgttcctcat agagtctttt gccatgattt atggtgtttt
3781 ttgaaatttg tcttaattga aaaaagacca aatatttcaa atgagcttat aggcagctgt
3841 ggccagtgaa aatatggggt tgtacagtta gttcctagaa tgttattttg cactagttgt
3901 cacttagaaa gatggggttc ctgtagattt tttggtgcta agggatactt tgtcattatg
3961 atgaagtaag tgttaagtgt cagataaata gcacacagaa tagttctttc tgctggtctg
4021 ttttttctct tcgttgttgt tgtttttaat tgtaaattgt tatcaatcaa actattgtag
4081 cagctacaaa gtaattcacc agcatgacaa aatggtcaaa aaataagtca tcagcactta
4141 agaaatgaaa gcaacttttg aaattttctg ttaaaattgt caaatatatt ttatgaagaa
4201 tttataaaag gggaaaatga ttgtaattta ttgttcatga cttttttttt taaataaagt
4261 gagtttcaac aaaaaaaaaa ccgaaaaaaa aaaaaaaaa
//