LOCUS BC028709 2908 bp mRNA linear HTC 18-NOV-2006
DEFINITION Homo sapiens cDNA clone IMAGE:4826921, containing frame-shift
errors.
ACCESSION BC028709
VERSION BC028709.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2908)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2908)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..2908
/db_xref="H-InvDB:HIT000091651"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4826921"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 955 a 517 c 600 g 836 t
ORIGIN
1 agcggatcgt tacccacccg cccgccatag ctcctcgggg gagtcagtgc caggctgcag
61 cacacgctgc cttttcagga acccgaattt gggaagttta ctcatgtcta agtccagctg
121 gagaaaacaa ggatattaag ataactattt tctggagggc tgaaggaaat tcaaaatgat
181 ttagaccttc tcaagtgtta ggaataatcc ctgcggcatg caccctgtgt acccttcgac
241 tttgagcaat catgatgctg ctgcaccttt caattaattg tgcaaactaa agttttcctc
301 tttaagtggc attattttgg catgagtttt aaagacaaag atgagagaat ttcttgtttg
361 gaagcctacg taactttgac atctaagagc tcaagattta ctgatgaaac agagattttg
421 aagatgtcgc aaaggcactc aggtcaagct ggcactgaag caggaaatgg ggcggactct
481 cctccaattg tcaactccaa gtactccacc ttcagagatt tttgttccac atcttcattt
541 caagatagtg gctacaatga gttaaaatct tgtagcttgg ataatataga taaagaatat
601 cttggaaaga aagaaaaagg cccaacatta ctctatgagc accctgaaac ttcaggcctg
661 ggcttaacac atcctttaga atctcccact caaaaaaaga aatgtatctt gcctagaaag
721 gaaaaggata aaaccccaga actttgtgaa acacctaaaa tcagtgggaa aaaatgttta
781 cctcgcagaa ggttgaatgt atctttcgct cttctaaaag gggactttga atcacaaaat
841 agttctttag aaagtagtat aagccaagtt atcaacttag aaaaaaatat tccaagcagt
901 gcttcaggtt tttccagggc aaataatttt agccctttag ttactagcac tttaaaaaca
961 gaagaagtga cttcatgcag tcaaaaattg aggcttaatt tttctcagca aaagacttcc
1021 acaattgatg attccaaaga tgattgtagc ctatttgaag ttgaatgtat atctccaatt
1081 cagggcaata attttaaaga ctctatcaca catgacttta gtgatagcag tttatgcatt
1141 aatgatgaga atgcatgtcc agagctcctg ggctcctctg ttagtggaac aacttgtgga
1201 acagatgagg acatatttgt gactccgata agtaatcttg tggcaaacat tagatttaac
1261 gcaagtcaaa tactttctcc ttcacctgaa gtgagaggca gtatttcaac gcctgaagac
1321 agtggtttta actcacttag cttggagaaa tcagaagatt ccctgtctga ccaggagggt
1381 tcttttcaag aactactgca gaaacataag gggactccca aagttgggga caccataaga
1441 aagacaagac atcttggaag gtcgagaaga ctgtccaccc ttcgggaaca aagctcgcag
1501 tcagagacag aagaggaaaa gcagattgtc caccctgact ctgaaaaaag agcagcagct
1561 gcttctgcca tctcagaggg tcagctgagt agtgatgaga gtggggattt gacctttagc
1621 ttaaagaatt tatcaaagac cccagccttg caattggtac atgagctgtt catgaaaagc
1681 aagaggaaaa gattacagga aatagtggac atgaattctt agagcaaggg gatggggaga
1741 aaatagctgt actgcagtgt atacttgcag gactgattgg caagaaaatg ggtatagaaa
1801 aactggacat cttaacagaa ttaaaatata gaaatttaaa gcatattctt gctatggttt
1861 tagagtcctt gaccgcagag agcctatgca gtgtttggaa agtaagcaga aattggcgtg
1921 aaattgttgt tcaagataaa aatgcaaatc ggaggaggaa attttatatc acacaactga
1981 aaacagattc tgagggggct gtattaaatg tcgaggatgc tgccactcgg ctccagcttt
2041 taaatcgctc agctttaaga tctgtgcagg cacaggctag gatacctggt tctcagagag
2101 agcaagggtc aacattatct ccctggggag aagttttgac acctctagca agctcttctg
2161 ttactcactt aagtagtaaa caggaagaat atgttaaggt tgccaaaaca ctttttactg
2221 atgaagcatt aaaaccttgc ccaaggtgcc agtcccctgc taagtaccag ccatataaga
2281 aaaggggact gtgtagcaga acagcctgtg gttttgactt ttgtgtgtta tgtctgtgtg
2341 cttatcatgg gtctgaagaa tgtagtagag gagcagcaaa gccaagaaat agaaaagatg
2401 ctctcccagg aagtgcccag agtaagcgga atttaaaacg cctctgaaga gactaaatat
2461 agaactcccc catgcagtgt tctatttatc tgacttaaaa ttatgaatat tttgaataca
2521 tgcaaatctt cccattaatg acaggtgatg attaatttcc tattttgtat atattataat
2581 cgatgtcatt gtatgttttc tttaaagttg ttttgaaaaa attttatttt actatgtcat
2641 tttacccatt ttaataactt ggtattttaa ataaagaatt ttcattgttg ttatatgtat
2701 gtactttatt gttttatgta acattttaaa tttgtgcatt tcatcactct tgacatgttc
2761 ttcaatcctt ttttaaaaaa atagtttttc agataatatt aaagattttg aactctagac
2821 agatggcctt atagatttgg aaaatgagta cttgactgaa atgaaatata aataaaatat
2881 tttcagaagt ccaaaaaaaa aaaaaaaa
//