LOCUS BC028707 2773 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens transketolase-like 2, mRNA (cDNA clone MGC:26975
IMAGE:4825223), complete cds.
ACCESSION BC028707
VERSION BC028707.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2773)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2773)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028707.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222342.
FEATURES Location/Qualifiers
source 1..2773
/db_xref="H-InvDB:HIT000040615"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26975 IMAGE:4825223"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2773
/gene="TKTL2"
/gene_synonym="DKFZP434L1717"
/db_xref="GeneID:84076"
/db_xref="HGNC:HGNC:25313"
CDS 105..1985
/gene="TKTL2"
/gene_synonym="DKFZP434L1717"
/codon_start=1
/product="transketolase-like 2"
/protein_id="AAH28707.4"
/db_xref="GeneID:84076"
/db_xref="HGNC:HGNC:25313"
/translation="MMANDAKPDVKTVQVLRDTANRLRIHSIRATCASGSGQLTSCCS
AAEVVSVLFFHTMKYKQTDPEHPDNDRFILSRGHAAPILYAAWVEVGDISESDLLNLR
KLHSDLERHPTPRLPFVDVATGSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESS
EGSVWEAFAFASHYNLDNLVAVFDVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVD
GHDVEALCQAFWQASQVKNKPTAIVAKTFKGRGIPNIEDAENWHGKPVPKERADAIVK
LIESQIQTNENLIPKSPVEDSPQISVTDIKMTSPHAYKVGDKIATQKTYGLALAKLGR
ANERVIVLSGDTMNSTFSEIFRKEHPERFIECIIAEQNMVSVALGCATRGRTIAFAGA
FAAFFTRAFDQLRMGAISQANINLIGSHCGVSTGEDGVSQMALEDLAMFRSIPNCTVF
YPSDAISTEHAIYLAANTKGMCFIRTSQPETAVIYTPQENFEIGQAKVVRHGVNDKVT
VIGAGVTLHEALEAADHLSQQGISVRVIDPFTIKPLDAATIISSAKATGGRVITVEDH
YREGGIGEAVCAAVSREPDILVHQLAVSGVPQRGKTSELLDMFGISTRHIIAAVTLTL
MK"
BASE COUNT 780 a 592 c 643 g 758 t
ORIGIN
1 aggcggaggg gaggcgaggg cggggcggtc acgtgagagc actgccgcgg tgggttgtgg
61 gggtgctgcg gcgccgtttg ctttgccaaa ccgacaaaag agagatgatg gccaacgacg
121 ccaagcccga cgtgaagacc gtgcaggtgc tgcgggacac agccaaccgc ctgcggatcc
181 attccatcag ggccacgtgt gcctctggtt ctggccagct cacgtcgtgc tgcagtgcag
241 cggaggtcgt gtctgtcctc ttcttccaca cgatgaagta taaacagaca gacccagaac
301 acccggacaa cgaccggttc atcctctcca ggggacatgc tgctcctatc ctctatgctg
361 cttgggtgga ggtgggtgac atcagtgaat ctgacttgct gaacctgagg aaacttcaca
421 gcgacttgga gagacaccct accccccgat tgccgtttgt tgacgtggca acagggtccc
481 taggtcaggg attaggtact gcatgtggaa tggcttatac tggcaagtac cttgacaagg
541 ccagctaccg ggtgttctgc cttatgggag atggcgaatc ctcagaaggc tctgtgtggg
601 aggcttttgc ttttgcctcc cactacaact tggacaatct cgtggcggtc ttcgacgtga
661 accgcttggg acaaagtggc cctgcacccc ttgagcatgg cgcagacatc taccagaatt
721 gctgtgaagc ctttggatgg aatacttact tagtggatgg ccatgatgtg gaggccttgt
781 gccaagcatt ttggcaagca agtcaagtga agaacaagcc tactgctata gttgccaaga
841 ccttcaaagg tcggggtatt ccaaatattg aggatgcaga aaattggcat ggaaagccag
901 tgccaaaaga aagagcagat gcaattgtca aattaattga gagtcagata cagaccaatg
961 agaatctcat accaaaatcg cctgtggaag actcacctca aataagcgtc acagatataa
1021 aaatgacctc cccacatgct tacaaagttg gtgacaagat agctactcag aaaacatatg
1081 gtttggctct ggctaaactg ggccgtgcaa atgaaagagt tattgttctg agtggtgaca
1141 cgatgaactc caccttttct gagatattca ggaaagaaca ccctgagcgt ttcatagagt
1201 gtattattgc tgaacaaaac atggtaagtg tggcactagg ctgtgctaca cgtggtcgaa
1261 ccattgcttt tgctggtgct tttgctgcct tttttactag agcattcgat cagctccgaa
1321 tgggagccat ttctcaagcc aatatcaacc ttattggttc ccactgtggg gtatccactg
1381 gagaagatgg agtctcccag atggccctgg aggatctagc catgttccga agcattccca
1441 attgtactgt tttctatcca agtgatgcca tctcgacaga gcatgctatt tatctagccg
1501 ccaataccaa gggaatgtgc ttcattcgaa ccagccaacc agaaactgca gttatttata
1561 ccccacaaga aaattttgag attggccagg ccaaggtggt ccgccacggt gtcaatgata
1621 aagtcacagt aattggagct ggagttactc tccatgaagc cttagaagct gctgaccatc
1681 tttctcaaca aggtatttct gtccgtgtca tcgacccatt taccattaaa cccctggatg
1741 ccgccaccat catctccagt gcaaaagcca caggcggccg agttatcaca gtggaggatc
1801 actacaggga aggtggcatt ggagaagctg tttgtgcagc tgtctccagg gagcctgata
1861 tccttgttca tcaactggca gtgtcaggag tgcctcaacg tgggaaaact agtgaattgc
1921 tggatatgtt tggaatcagt accagacaca ttatagcagc cgtaacactt actttaatga
1981 agtaaactag gcttatttct aaaaagtcaa gtctattggc tttggcccaa aagcactggt
2041 atctttgtat taaattcatg tttattgtca caaaaccatt atttatacct atacagttgt
2101 actgtttctt ttaaagcaaa gccatttaac atctttcttc attcctaatt tggaaattaa
2161 agtttacctt tctgttaatc tatgtataaa tgttactctg agttattaat gtggatttta
2221 aaattgtaag caatagaata ggaaataaaa caactaccta atacaaatat ttctgataag
2281 actacaaata tcttactgag ctggggatta aagtagaggt aactgtatct taaatgagta
2341 tgatttcctt gtaagttaaa aaaattgaaa tttaattgta gacttcaata gtccaagttt
2401 tgaaggatgt ttgagctttt gtataatgcc atttatacct gcagttttac agataatgtt
2461 tgactgcagt tgccttggaa attcctccaa agtttgcctt catctctcct ctacagtttg
2521 gaggtgatgg tgcagcagtg gaacatctct tgatgcacca cactacttgt gttgtgtgaa
2581 gtgatgaaag tataactggt tctagtttgc acactacaca catagttttg tgaagcttca
2641 gaaatgtttt ttcttttcct tgtggccaaa ccagtttgtt aatctgatta tattcatctg
2701 ctaatgatac taaagttaat gtaataaagc atttaaaaat caaaaaaaaa aaaaaagaaa
2761 aaaaaaaaaa aaa
//