LOCUS BC028630 2162 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens lipoma HMGIC fusion partner-like 5, mRNA (cDNA clone MGC:33835 IMAGE:5262164), complete cds. ACCESSION BC028630 VERSION BC028630.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2162) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2162) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC028630.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: g Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222377. FEATURES Location/Qualifiers source 1..2162 /db_xref="H-InvDB:HIT000040596" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33835 IMAGE:5262164" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2162 /gene="LHFPL5" /gene_synonym="dJ510O8.8" /gene_synonym="MGC33835" /gene_synonym="TMHS" /db_xref="GeneID:222662" /db_xref="HGNC:HGNC:21253" /db_xref="MIM:609427" CDS 378..1037 /gene="LHFPL5" /gene_synonym="dJ510O8.8" /gene_synonym="MGC33835" /gene_synonym="TMHS" /codon_start=1 /product="lipoma HMGIC fusion partner-like 5" /protein_id="AAH28630.1" /db_xref="GeneID:222662" /db_xref="HGNC:HGNC:21253" /db_xref="MIM:609427" /translation="MVKLLPAQEAAKIYHTNYVRNSRAVGVMWGTLTICFSVLVMALF IQPYWIGDSVNTPQAGYFGLFSYCVGNVLSSELICKGGPLDFSSIPSRAFKTAMFFVA LGMFLIIGSIICFSLFFICNTATVYKICAWMQLAAATGLMIGCLVYPDGWDSSEVRRM CGEQTGKYTLGHCTIRWAFMLAILSIGDALILSFLAFVLGYRQDKLLPDDYKADGTEE V" BASE COUNT 523 a 596 c 524 g 519 t ORIGIN 1 gggggctggc cgcggtgctg aaacggcgcc ctccgcggac ggaggagggg gcggggctct 61 cgggagccgt gagccgggaa gagggagacg ggcagggcgg cgccagcagg ccgtggtggg 121 cttgggagga ggcaggagac tggagacagc ctcggctaga gcggacacag gcacctggca 181 agctttcctt gaccaaatca aggttgtcct tgtcctatta agcctcttcc ccttgccttg 241 aagggacctc acctggtgcc ctgacgtcag cctactcccc aaaccccgct ggggagtgac 301 ctgcttctag gcctgcatcc acaaagctac ggacttgcag cccacgggac cccagcccag 361 ggcctgctgc cctcaccatg gtgaaattgc tgccggccca ggaggcagcc aagatctacc 421 ataccaacta tgtgcggaac tcgcgagccg tgggcgtgat gtggggtacc ctcaccatct 481 gcttctccgt actggtcatg gccctcttca tccagcccta ctggatcggc gacagcgtca 541 acacaccgca ggcaggctac ttcggccttt tctcctactg cgtgggtaac gtgctgtcct 601 ccgagctcat ctgcaagggc ggccccctag acttctcctc catcccctct agagccttca 661 agactgccat gttctttgtg gccttgggca tgttcctcat cattggctcc atcatctgct 721 tcagcctgtt cttcatctgc aacacggcca cagtctataa gatctgtgca tggatgcagc 781 tggctgcggc cacaggccta atgattggct gcctggtcta ccctgatggt tgggactcaa 841 gtgaggtgcg gcgcatgtgt ggggagcaga cgggcaagta cacgctgggc cactgcacca 901 tccgctgggc cttcatgctg gccatcctca gcattggcga cgccctcatc ctctccttcc 961 tggccttcgt gttgggctac cggcaggaca agctcctccc tgacgactac aaggcagatg 1021 gaacagagga ggtgtgaagc agctgaaggg tcggtcatct atttcccaga cacaggaaaa 1081 ctagggaatc aaattcttca gagataagaa cttgttcttc caagtttcct tgttcctggc 1141 tactataggc ctgaagcctg aagcctttta ttataacact aaaactggac agtctcctga 1201 gacaagacct cctactgtac tctttctggg gaagcagaac tgcagtgacc cacttcaaag 1261 atattcagag gctgagcggt gcagggagtg ctcagttgct ggggatggga tccaagtcca 1321 tttcttagtt ccacacagca gcaaatcgct tcaccttctt gaagcctctc ctctgtaaag 1381 cgagagggct aaatgggtcc atctctaggg gccttccctc ccaggtctgt gtctgatagc 1441 atacacacac acatatatat acacacacac acacacacac acacacacac acacatacat 1501 acacacacac atatatatac acacacacac acacacacac acacactctc tctctctctc 1561 tcaaacacac acaaatgccc aaccagctct aagagggcac tgaagaggtg gctggacatg 1621 tgctgggtca tttttagggt gaggtgtagg gggtcttttg cttctccctt ctcatatttt 1681 gttttcttat tgctgctcag aggggggtaa ggaatggagg ggccatcaga acttgaatcc 1741 tttaacatcc accaggaagt tttatgaaga gtgggtgata ggatctaaaa tctctgcaga 1801 cttttttcct cccgggagcc aaatatcaca tttccttatg gtgcccacac tgactcaacc 1861 agaactggct accagcttca gaaatgtgtt acttatgttc aagtaatttg ttataggaat 1921 agatgacatt tttttttttc aaaaactttg gatttggcat atagtcatct atagggggat 1981 tggttccagg atcccctgca gatgccaaaa tacatggatg cccaagtcct cagctaaaaa 2041 tagcgtagta tttgcatata acctatgcac atcctcctgt atactttaaa tcatctctag 2101 attacttata atacctaata caatgtaaat gctatgtaaa tactcaaaaa aaaaaaaaaa 2161 aa //