LOCUS BC028617 4947 bp mRNA linear HUM 26-JUN-2008
DEFINITION Homo sapiens zinc finger, CCHC domain containing 24, mRNA (cDNA
clone MGC:33537 IMAGE:4821347), complete cds.
ACCESSION BC028617
VERSION BC028617.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4947)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4947)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: i Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23503314.
FEATURES Location/Qualifiers
source 1..4947
/db_xref="H-InvDB:HIT000040592"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33537 IMAGE:4821347"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4947
/gene="ZCCHC24"
/db_xref="GeneID:219654"
/db_xref="HGNC:HGNC:26911"
CDS 190..915
/gene="ZCCHC24"
/codon_start=1
/product="zinc finger, CCHC domain containing 24"
/protein_id="AAH28617.1"
/db_xref="GeneID:219654"
/db_xref="HGNC:HGNC:26911"
/translation="MSLLSAIDTSAASVYQPAQLLNWVYLSLQDTHQASAFDAFRPVP
TAGAAPPELAFGKGRPEQLGSPLHSSYLNSFFQLQRGEALSNSVYKGASPYGSLNNIA
DGLSSLTEHFSDLTLTSEARKPSKRPPPNYLCHLCFNKGHYIKDCPQARPKGEGLTPY
QGKKRCFGEYKCPKCKRKWMSGNSWANMGQECIKCHINVYPHKQRPLEKPDGLDVSDQ
SKEHPQHLCEKCKVLGYYCRRVQ"
BASE COUNT 1109 a 1370 c 1327 g 1141 t
ORIGIN
1 agcggagtag gggggaggcg gcggcagcgg cagcggctgc gggcagcgcg cggggcgcag
61 ggcgcggggc gatcaccgtc ggggctcggg aggcgggcag tgggcacagg ctccccggtg
121 cccgcccctc cgctgcggag gggggccgcg agcgggcggc cggggagggg ccggcaccgc
181 cgccacaaaa tgagcctgct gtcggccatc gacacgagcg ccgcctcggt gtaccagccc
241 gcccagctgc tcaactgggt ctacctgtcg ctgcaggaca cgcaccaggc tagcgccttc
301 gatgccttcc ggcccgtgcc gaccgccggc gccgcacccc cggagctggc cttcggcaag
361 ggccgccccg agcagctggg ctcgcccctg cactccagct atctcaacag cttcttccag
421 ctgcagcgcg gagaggcgct gagcaacagt gtgtacaagg gcgcctcacc ctatggctcc
481 ctcaacaaca tcgccgatgg cctcagctcc ctcaccgagc acttctcaga cctgaccctc
541 acctccgagg ctcgcaagcc cagcaagcgg cccccaccca actacctgtg ccacctgtgc
601 ttcaacaaag gacactacat caaggactgc ccccaggcac gccccaaagg cgagggcctg
661 actccatacc agggcaaaaa gcgctgcttc ggcgagtaca agtgtcccaa gtgcaagaga
721 aaatggatga gcgggaactc ctgggccaac atggggcagg agtgcatcaa gtgccacatc
781 aacgtgtatc cacacaagca gagacccctg gagaagcccg acggcctgga cgtgtccgac
841 cagagcaagg agcacccgca gcacctctgc gagaagtgca aggtcctggg ctactactgc
901 cgtcgcgtgc agtgacgggc tgcccgcccg cacccagagc caccccccgc cagcccgagg
961 agacgctgct tccctgtgct actccgaggg gctgcgtgtc gccctgtgca tggggtgccc
1021 tcgcaggcct gcggggctgg gccgggggct cttagcgtcc ttgtcttgtg tgtgttgaca
1081 aacagtgtta ctgacattgc tgccccccac aggccaggga aagcagggag tctggggctt
1141 tttgcaggcg ggcctggggt ctcagtggag gggacaaagg caagcaaaag cccatgtcca
1201 ggagccctgg gtgtccccac aggctcgcct ctgagagcct ctttggggtg agcagccttg
1261 tattggccac aggtgcacta aattgactgt gaatcccaaa cctccccaga ccagccaggc
1321 cgcctgcccc cacccagaac cttccggttt gccctgtatg gaaagccact ctcggaaatc
1381 cctctttcct gagtcagcaa tcgtggcaag gggacatgtg ttccaacagc ggctggggag
1441 tggacctctc tgtcccttgc ccaccttaag ccccaaatcc ggaccccctc tgacatcact
1501 ggcattgcac ctgggtgtgc ccccctcccc acgctatgga cccagatagg aggggttagg
1561 catgggggag gcacagaatg ctggagagat gcgtcctggt gaacgtgggg cagcccctcc
1621 cacgaccccc accagactgc cttaggtttt gtcagcccca ctccctttcc ttcccctctg
1681 cctcccaccc actctggggg tccacatcaa gatagctggg cccagtgtgg aagcccagcg
1741 tgtctgttct agcagaaagg acacaagcct ggtgttctgg agacctcggc tcaagtcttt
1801 gccctgctgc cgacgcattg tgtcaccttg ggcaaggact tcgcatctcc aggcctcagt
1861 ttccccatta gttaaatgac agcataacac tagagagcag agggcccatt tcagctctgt
1921 tgttctggga ttcaggctgg ccggtgctgt gtcctggagc tttatttggg gagtttcacc
1981 cagaatggtg ggagaaacct cccaggtgcc aggtaccccg catcgtgacc cttcacttgg
2041 tgtcttagga agtcaagctg agggatgctg agtcctcccc tgctggcccc tgcagcccca
2101 gccctgcttt tcatccccca cccctgcaaa catggaggag ccccctcctt ctcacctcgg
2161 tctcctagcc cctgacatgg agaagcctga gacaagccac agaacccctc ttttctaaaa
2221 tggagacaat aatttcctac ctcccaaggg agcagagagg cctcgtggca cgtccgtggc
2281 cagggagccc actgtcctgg ctggcggcgg gatcgtgcgc tcctctgtct cccggatgag
2341 aagccccgtt tccatggtct tgacccttcc tttctcccgg ctgtcagaac tgggtctctt
2401 gattttgccc ctacattatg cctctgtggg aaaaaaaaaa aatcagacca agaaatgagc
2461 ctgaaattca gtgtttacca tggctcaagg atgcccatct ggtgtccagt tgccttttgt
2521 attcaaatga aaatgctttg tacaactgag gagttacagt gaagtgttaa ccaggggtcc
2581 agggagcgag ttgaaaagat ggagtgagtg tatttgcagc cagggagctg cagggtggat
2641 ttgaggggcc ataccctctg agcacttaaa aaaggtattt gctccaggcc aggcagcagg
2701 ctgtggacac ccttgccacc actggggact gccactgagg actccccgag cacgttgttc
2761 cccgtcttct ccaaggtgtt gaggtgagct ggggttggcc ccggcccagg cttctgtccc
2821 aaggagaagc tgccactgac agtcatccta ccgcactgct aaagagaatg ttcgcagtgg
2881 tgggcagcgt gcctgtgcca acccttccag ggacccggcc atgggggacc ttggcccaag
2941 gatgcctggg gcctgccagc tgtgctgcaa aggtgggggg cccacaccct aaaactaacc
3001 caggccccag accactggag gccagggctt ccctgcacgg gctaagggga gttgggatat
3061 caccccaaag tgaccttgcc agtgagctgt tcagcaggta gccactgccc tgccatctgt
3121 gcagagccag ccaccttggg ggctggggtt cccgctttga ggcccacctt ccatactccc
3181 cttgactcgg ctctggctga actggggaac tctcttgtgg tcagcaaagc ccctgccatg
3241 caggccaggt gccattgaga attaagtgct cagagggcca ggagcccagg ggatgggaaa
3301 gtgtgtggtt ttagtacgtt caaaagggac aatcgcttgc agttggtaga tctagcgatc
3361 tagttgggag ataatggtgt ttaccccata tgaagtattc aatagttcta cttgtgaatt
3421 tgtatttatt ttgagttata cttgacacag aattcctttt ttaaaaaaat atgtgtgtat
3481 tttggaaaaa aaattcatag atgttaaaat ttctgcatgg ttaccagttt ttctcacaac
3541 actgaatttg gtagcttttc ccgaaaaaat cttcacagta attttttgtc tgtatatatt
3601 tgagggcctt ttttttaaaa aaaaaaaaga aaagaaaaat ataattgttt gatttttgag
3661 attaaaacaa acaaaaagag aggcattttc aaaatttcag aactttcagg agggcaagag
3721 aatatcaaac aaagatttct ggaagtattt tgccaacctt ctggttgagc tgcaagaaaa
3781 tatttatggt gagaactttt ctgtttcccg ttattgggtt tttggttggt ttttgtttgt
3841 tttttactat gctttggtct gtaaaaatat gcaactgaac tacattcaga aggaaatatt
3901 gtctacatag aatattatat gaagttggta cataattctg atgaggaaaa aaaatctttg
3961 caattcttta agccatattg ttgtttttct gtgttgtttt ccctggatga aaatatcagt
4021 attaagtaga cagcatatta ttcaagtgtt tagacttatt aatatgttct tgtcctgtat
4081 ttatacatat gtgtattttg gaaagtattg ccttttttaa gggaagctat aattcgatac
4141 atagtgaaaa agggaatggt gacccctttg tgcctcttcc actgaggata acaaacagca
4201 ttgtaatcca ttctcttgca ccttcttctt cttatcttgt tattacggtt ttattaattt
4261 tgtagaggga cagggagtgg gcaaggggaa gaagcagctt atttgactaa ccagcccctc
4321 tgtggtccac cagcgtcttg gcttggtggg agggctctca atcagcaggg ccccaggagg
4381 gaagaagaag tggggcaaag cctggcctcg ccgctcggga gctttgccat ctgagccacg
4441 cctcctccag gccatgctcc ttgaacttgg aaatgtcaac cggagccctt acaccagccc
4501 tccagcatct aatagacttg aatctactct aaacgaatat ttaatccaac ctcactacat
4561 tgtagctcag tccaacgact aaccctgaaa tgggggtgtt ccagccttca gcgagatggc
4621 caagcggtcc cctgggggct gtggcagcgg gcttatcctt ctctgttgcc aaccttgccg
4681 tccgacctcc tccgccccca tgcggtgacc ccgtccgtgt ctgtgtctgt ccatacgtgt
4741 gagtccagct aaaaagacaa aacagaaccc gtgggcccag ctcggaaggt gcgtggagaa
4801 ggctccgacg tctccgaagt gcagcccttg ggatggcatt ccgttgtgtg ccttattcct
4861 ggagaatctg tatacggctc gcctatagaa atatagcctc ttcatgctgt attaaaagga
4921 cttttaaaag caaaaaaaaa aaaaaaa
//