LOCUS BC028608 4210 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens KIAA0776, mRNA (cDNA clone MGC:33250 IMAGE:4825054),
complete cds.
ACCESSION BC028608
VERSION BC028608.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4210)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4210)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059722
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..4210
/db_xref="H-InvDB:HIT000091622"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33250 IMAGE:4825054"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4210
/gene="KIAA0776"
/gene_synonym="RP3-393D12.1"
/db_xref="GeneID:23376"
/db_xref="HGNC:HGNC:23039"
CDS 28..1557
/gene="KIAA0776"
/gene_synonym="RP3-393D12.1"
/codon_start=1
/product="KIAA0776 protein"
/protein_id="AAH28608.1"
/db_xref="GeneID:23376"
/db_xref="HGNC:HGNC:23039"
/translation="MADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQ
LEVVHTLDGKEYITPAQISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIK
SEKHVQLVLGQLIDENYLDRLAEEVNDKLQESGQVTISELCKTYDLPGNFLTQALTQR
LGRIISGHIDLDNRGVIFTEAFVARHKARIRGLFSAITRPTAVNSLISKYGFQEQLLY
SVLEELVNSGRLRGTVVGGRQDKAVFVPDIYSRTQSTWVDSFFRQNGYLEFDALSRLG
IPDAVSYIKKRYKTTQLLFLKAACVGQGLVDQVEASVEEAISSGTWVDIAPLLPTSLS
VEDAAILLQQVMRAFSKQASTVVFSDTVVVSEKFINDCTELFRELMHQKAEKEMKNNP
VHLITEEDLKQISTLESVSTSKKDKKDERRRKATEGSGSMRGGGGGNAREYKIKKVKK
KGRKDDDSDDESQSSHTGKKKPEISFMFQDEIEDFLRKHIQDAPEEFISELAEYLIKQ
V"
BASE COUNT 1449 a 687 c 796 g 1278 t
ORIGIN
1 agcggtacta ctgcgagtca ggccgtgatg gcggacgcct gggaagagat taggcggttg
61 gcggccgact tccagcgggc gcagttcgcc gaggccacgc agaggttgtc cgagcggaac
121 tgcattgaga ttgttaataa attgattgct cagaaacagc tagaagtagt tcatacactc
181 gatggaaagg aatatattac tccagcccaa attagtaaag aaatgagaga tgagctacat
241 gtccgaggtg gtcgagtaaa cattgttgat ctacaacagg taattaatgt ggacctgatt
301 catattgaaa atagaattgg tgacattatt aaatcagaaa agcatgttca gttagtgttg
361 ggacaactga tagatgagaa ttatttggat cggttggcag aagaggtcaa tgataaattg
421 caagaaagtg gtcaggtcac catatcagaa ctgtgtaaaa cttatgatct tcctgggaac
481 tttctgacac aggcactaac tcagcgactt ggtagaatta tcagtggaca tattgatctt
541 gataatagag gagtaatttt tacggaagct tttgtagctc gacataaagc acgtatccgt
601 ggactattca gtgctattac ccggcctaca gctgtgaatt ctttgatttc aaaatatgga
661 tttcaggagc agcttcttta ctctgtgctt gaggaacttg ttaatagcgg acgcttacga
721 ggcactgtgg ttggtgggag acaggataaa gctgtgtttg tccctgacat ctactccagg
781 acacagagta cttgggtgga ttcctttttc aggcagaatg gctatctaga atttgatgct
841 ttgtccagac ttggaatccc agatgctgta agctacataa agaaaagata taagactaca
901 caactcttgt ttttgaaagc agcttgtgtt ggtcaaggac ttgtggatca agtggaagca
961 tcagtagaag aagccatcag ctctggaaca tgggttgata ttgcacctct gctacccact
1021 tctttatcag ttgaagatgc tgccatattg cttcagcagg tgatgagggc attcagcaaa
1081 caggcctcaa ctgtagtctt tagcgacact gttgtagtca gtgaaaaatt tataaatgac
1141 tgtacagaac tgttccgtga gctgatgcac cagaaagctg aaaaggaaat gaaaaataat
1201 cctgtgcatt taatcactga agaagatctg aaacaaatct ccactttaga aagcgttagt
1261 acaagtaaaa aggataaaaa agatgagcga agaaggaaag caacagaggg cagtggaagc
1321 atgagaggag gaggtggggg caatgccaga gagtacaaaa ttaaaaaagt caagaagaaa
1381 ggaagaaaag atgatgatag tgatgatgaa tctcaatcat cccacactgg aaagaagaag
1441 ccagagatca gttttatgtt ccaggatgag attgaagatt ttttaagaaa acacatacaa
1501 gatgcccctg aggagtttat ttcggaactt gctgagtact taataaagca agtataaaat
1561 acctcttaat aaaacttatc tcgaggtggt acgttcagta ttcatgtctt caacaacttc
1621 tgcttctggg acgggcagaa aacgcacaat caaggacttg caagaagaag tttcaaacct
1681 gtacaataac attaggttat ttgaaaaagg gatgaagttt tttgcagatg acacacaggc
1741 tgctcttacc aaacacttgc tgaagtcagt gtgtactgat atcactaacc tcattttcaa
1801 cttcttagct tcggatttaa tgatggcagt agacgatcct gcagccatta caagtgaaat
1861 aagaaagaaa attttaagta aattatcaga agaaaccaaa gtagctctta caaaactcca
1921 taactctctg aatgaaaaga gcatagaaga ctttatttct tgtctggatt ctgcagcaga
1981 agcttgtgat attatggtga aaaggggaga caaaaaaagg gaaagacaga tactgttcca
2041 acatcgacaa gcactggctg aacagctaaa ggtcacagaa gaccctgctc ttattctgca
2101 cctcacatca gtcctgttgt ttcagttttc aacccacagc atgctccatg cacctggaag
2161 atgtgtccca cagatcattg cttttcttaa tagtaaaatt ccagaggatc agcatgctct
2221 tttggtaaag tatcaaggtt tggttgtaaa gcagctagtc agtcaaagta agaagactgg
2281 gcagggagat tatcccttga ataatgaatt agacaaagaa caagaagatg ttgccagtac
2341 tactcgtaaa gagcttcaag aactttcttc atccattaaa gaccttgttc tcaaatctag
2401 gaaatcatct gtgacggaag agtaatgatc ttaatttaca tttgtcatat agtaagcatt
2461 ttcccccaag gttgaaggtg agtggtcaca aaaaagtagt cactatacaa ctcccctctc
2521 cctgcaaaaa ccacctcata cacacacaat tcagttaaaa cagtagtatt gtattaaatg
2581 taaatcttaa aaagatgtga atttttgtaa attgggttct tcatggaagt ttttttccac
2641 ctgattttca cacaaatact atatgaaatt tttcacatta ttttcacata attttaaaaa
2701 ttacatattt caggtttgtt ctctttccaa atgttgaatg aaaaacaaat tttccaatcc
2761 atttatccct ggggaaggat tcatttgttg cgagtgccag tatacttaaa tgtatacttt
2821 atatacattt aagcagaaat ttaaaatgtg gtcttttttt tttaaaagaa acacttctgt
2881 gtcagaaatg aaaataaatc atgtttttta tttttaaata gaaagcactt caaaactaaa
2941 atacagaaat ttacaaaaaa gaaaaattat tactaagccc ttgctcttat ttttggcaga
3001 ataaacattg attttggttg gggctgcaag gatgccttta caggtgcaca agaacgctag
3061 agtggcccat gcattgctgt gtctcttcta aaacaagcta ctaacaagag agagaacaca
3121 tgcaatttat taccagtaag cataagtcat atttaacatt ggaataacta agcattttat
3181 acaaagattt ttctttgacc cagtttgcat ttgtacattt tattttttta gttcaacagc
3241 tgctctgtca cataatactt tgtaaatact agtgtgaaaa acagatagga tgccttttcc
3301 agtggtagga gcatctgtaa gtgcatttaa atcattagaa gcttttttcc aaaactagaa
3361 acccttatta aaaaatagac atttttttct aaagattatt agttaaaaat aactaaaaga
3421 gttccttaga gtaatcattt caaccaaatg aatttcaagc aacaacttac ttactattta
3481 tcaaaaaggg atttaattat tttgaatata attataaatt aaatttcaaa tatttaaaaa
3541 tactatttta tataattcct tatgacattt taaactttat attttaaaat atttgaatac
3601 gaaaagatca gtctacctct actccattct agacaaagta ttaatcctta gtgaaagtaa
3661 ttaattaaat tgccaacttg gcattattat taaacttgat aggaacgcaa cattaaattt
3721 aaaaatgttt tcccgtgggt aattttctat tatatatttt catatgggca aagggaaaaa
3781 atgataaatc ctctgtaatc acaaacccca atttcgtttt gtttattcag cttctaaaat
3841 attgaacacc cagactttta attcaacctt taagaacctt atcatttatg tttcagtaga
3901 tatcaaagta atccatgttt gtgtcaaatg atcatagaaa ataaatagaa gagacagtga
3961 agcaagtaaa aagaaaagca ttgttttaat ttgtttgcat taattttttt catttgtcaa
4021 aatgcttctt ttgttgccac agtaaagaac agtttttatt gttttgtaag taaaattacg
4081 tagctgattt tgtatgtaaa gattaatttc cataataaaa attattgtat gtttactgtg
4141 atcttaatgg gcagggttaa gaaagttatt taaaataaag ttacctattc tactaaaaaa
4201 aaaaaaaaaa
//