LOCUS BC028418 3463 bp mRNA linear HTC 09-SEP-2005 DEFINITION Homo sapiens phosphofurin acidic cluster sorting protein 2, mRNA (cDNA clone IMAGE:4824255), with apparent retained intron. ACCESSION BC028418 VERSION BC028418.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3463) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3463) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: l Column: 4 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..3463 /db_xref="H-InvDB:HIT000091601" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4824255" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" BASE COUNT 729 a 1078 c 1034 g 622 t ORIGIN 1 agcggaggag tatgagagct tctcctccga gcaggaggca agtgacgacg ccgtgcaggg 61 gcaggacttg gacgaggacg actttgacgt ggggaagccg aagaagcagc ggagatcgat 121 tgtaagaacg acgtccatga ccaggcaaca gaacttcaag cagaaagtgg tagcgctgct 181 gcggaggttc aaagtgtccg acgaggtcct ggactcggag caggaccctg cggagcacat 241 ccccgaggca gaggaggacc tggacctcct gtatgacacc ctggacatgg agcaccccag 301 cgacagcggc cccgacatgg aggatgacga cagcgtcctc agcaccccca agccgaagct 361 gcggccatac tttgaaggcc tgtcgcactc gagctcgcag acggagattg ggagcatcca 421 cagcgcccgc agccacaagg agcccaagcc cggctgacgt gcccgagaag acgcggtccc 481 tgggaggcag gcagccgagc gacagtgtct ctgacacggt ggccctcggt gtgccaggcc 541 cgagggagca ccctggacag cctgaggaca gccccgaggc tgaggcctcc accctggatg 601 tgttcacgga gaggctgccg cccagcggga ggatcaccaa gacagagtcc cttgtcatcc 661 cctccaccag gtccgagggg aagcaggctg gccgacgggg ccggagcaca tccttgaagg 721 agcggcaggc agcacggccc cagaatgaac gggccaacag cctggacaac gagcgctgcc 781 cggacgcccg gagccagcta cagatcccca ggaagactgt gtatgaccag ctcaaccaca 841 tcctcatctc cgatgaccag cttcccgaaa acatcatcct tgtcaacacc tcggactggc 901 aggggcagtt cctctccgac gtcctgcaga ggcacacgct ccccgtggtg tgcacgtgct 961 ctcctgcgga cgtccaggcg gccttcagca ccatcgtctc acggatacag agatactgca 1021 actgcaattc ccagcccccg acccccgtga agatcgccgt ggcgggagcg cagcattacc 1081 tcagtgccat cctgcggctc tttgtggagc agctgtccca caagacaccc gactggctcg 1141 gctacatgcg cttcctggtc atcccactgg gtgagcacca cgccgtccac ctgggcctgg 1201 gcacagatgc cacgggcagt gtggcgtggc atggagtggt gtggcgtggc gtggcgtgtt 1261 gtgtggcgtg gcgtggcgcg gtgtgtcgtg gtgtggcgcg gtgtggcatg gcgtggtgtc 1321 cctgcttgct acacatttgt tgtttttaaa tgtttgtttg atacagtaac actttgttaa 1381 ttttaattat atgcaagata acttgattgc cctaaaacag ccatttgggt caagataaag 1441 ccatcgccct ctgaaggggc ctgagctggg tgtctcctcc atcagtcgct gtgataactc 1501 tatgccagtt tcgatttcca aagtcagaag tgcaaagcag ggctcgttat taatcctctc 1561 aaatcgtcca ggtcctgtgt cgtcgaactc cattacttct ttaggtccat acgatgtgtc 1621 ttaccacgaa acaaacccac ccagccttaa tctgttgacc agcagcaagg cctggaggcg 1681 acacctctcc cgtgtggccc tcacgatgcc gacgtcagag ccctgagcca gccgaggcct 1741 ctgcacggtc acatgtgccc tgctgggcct tcctcagtgg cactcagggc tctgggacct 1801 cagctcaggg ctggagctcc ttcagcgggg ccacaggcat ccaccaggga ggggcagtgg 1861 tggctttctc tttcggtggc aggaaagtgg gcttgtctgg aaggcagcag cacaggcctg 1921 gggtcgggtg gcccagcttt tgtgccgcgg tgggagcctt gcagctccga gtcccccgtg 1981 gtgacaccag ccccacccct ggcatgcagg ctcccacccc gtggccaggt acctaggctc 2041 cgtggactac cgctacaaca acttcttcca ggacctggcc tggagagacc tgttcaacaa 2101 gctggaggcc cagagtgcgg tacaggacac gccagacatt gtgtcacgca tcacgcagta 2161 catcgcaggg gccaactgtg cccaccagct ccccatcgca gaggccatgc tgacctacaa 2221 gcagaagagc cctgacgaag agtcctccca aaagttcatt ccctttgtcg gggttgtgaa 2281 ggttggaatt gtggagccat cctcggccac atcaggcgac tcggacgacg cggccccctc 2341 gggctctggc acgctctcct ccaccccgcc gtccgcatct cctgcggcca aggaggcctc 2401 acccaccccg ccctcctccc cgtcggtgag cggaggcctg tcctccccca gccagggtgt 2461 cggcgccgag ctgatggggc tgcaggtgga ctactggacg gcagcacagc ctgcggacag 2521 gaagagggac gccgagaaga aggacctgcc tgtcaccaaa aacacgctca agtgcacttt 2581 ccggtccctc caggtcagca ggctgcccag cagcggcgag gctgcagcca cgcccaccat 2641 gtccatgacc gtggtcacca aggagaagaa caagaaggtg atgtttctgc ccaagaaagc 2701 gaaggacaag gacgtggagt ctaagagcca gtgcattgag ggcatcagcc ggctcatctg 2761 cactgccagg cagcagcaga acatgctgcg ggtcctcatc gacggcgtgg agtgcagcga 2821 cgtcaagttc ttccagctgg ccgcgcagtg gtcctcgcac gtgaagcact tccccatctg 2881 catcttcgga cactccaagg ccaccttcta gccccaccca ccagggggcc cacctcctgc 2941 cccatgctgt gaggggccca gctgcatttc tgttaacatt tcagtttact acagagacag 3001 acgcttaaaa cacaaagaga aacagtctta agtatgaatg tgctcacaac gtggaaacta 3061 acgggggagc tcctgccagg agccgaataa ctgctctgct tattaacccg aacgttcggc 3121 ccggggctgg gaagccagaa ggacgatgct gagccatgga tcgcggaagg cgtcctctgg 3181 cctcaggagc cacccagagc ctcacaggct gagttcttgc ctctgtgtcc tgtccttcct 3241 ggaagtcagg actctgcttc ctcagggagc ccggggaagg cggagctcag tggccacagg 3301 ccgagggcca tggggccgct cagtcccgtt ggggttgtcc tgagttgagc ctgggggggc 3361 cgtcctgccc gcctaagaga tgcccccagc accgcacact cgtggttccc aataaactcc 3421 tgcctgcggc ggaggtttta tagcagcaaa aaaaaaaaaa aaa //