LOCUS BC028393 3019 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens MYCBP associated protein, mRNA (cDNA clone MGC:33343
IMAGE:4824998), complete cds.
ACCESSION BC028393
VERSION BC028393.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3019)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3019)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028393.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: m Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149699.
FEATURES Location/Qualifiers
source 1..3019
/db_xref="H-InvDB:HIT000040550"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33343 IMAGE:4824998"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3019
/gene="MYCBPAP"
/gene_synonym="AMAP-1"
/gene_synonym="AMAP1"
/gene_synonym="DKFZp434N1415"
/db_xref="GeneID:84073"
/db_xref="HGNC:HGNC:19677"
/db_xref="MIM:609835"
CDS 75..2918
/gene="MYCBPAP"
/gene_synonym="AMAP-1"
/gene_synonym="AMAP1"
/gene_synonym="DKFZp434N1415"
/codon_start=1
/product="MYCBP associated protein"
/protein_id="AAH28393.1"
/db_xref="GeneID:84073"
/db_xref="HGNC:HGNC:19677"
/db_xref="MIM:609835"
/translation="MVPGGTMKSLKKDSRLRITPTRLLEASENVKEKKRAKGPEQPTP
TIQEEPEPVSNVLQGDDILALAIKKEDLKEQHIPRLTEKEDKRVITQKFIIRKLKPMD
PRRKVCHLVARPANPDEATKPLDYSGPGDSFDGSDQILPHHILGSLQDFKRIALARGN
TQLAERIPTSPCLMTLISAEGESKQKAPKEEKRPPWAPPPQHNFLKNWQRNTALRKKQ
QEALSEHLKKPVSELLMHTGETYRRIQEERELIDCTLPTRRDRKSWENSGFWSRLEYL
GDEMTGLVMTKTKTQRGLMEPITHIRKPHSIRVETGLPAQRDASYRYTWDRSLFLIYR
RKELQRIMEELDFSQQDIDGLEVVGKGWPFSAVTVEDYTVFERSQGSSSEDTTYLGTL
ASSSDVSMPILGPSLLFCGKPACWIRGSNPQDKRQVGIAAHLTFETLEGEKTSSELTV
VNNGTVAIWYDWRRQHQPDTFQDLKKNRMQRFYFDNREGVILPGEIKTFTFFFKSLTA
GVFREFWEFRTHPTLLGGAILQVNLHAVSLTQDVFEDERKVLESKLTAHEAVTVVREV
LQELLMGVLTPERTPSPVDAYLTEEDLFRHRNPPLHYEHQVVQSLHQLWRQYMTLPAK
AEEARPGDKEHVSPIATEKASVNAELLPRFRSPISETQVPRPENEALRESGSQKARVG
TKSPQWKSIMEEILVEESPDVDSTKSPWEPDGLPLLEWNLCLEDFRKAVMVLPDENHR
EDALMRLNKAALELCQKPRPLQSNLLHQMCLQLWRDVIDSLVGHSMWLRSVLGLPEKE
TIYLNVPEEQDQKSPPIMEVKVPVGKAGKEERKGAAQEKKQLGIKDKEDKKGAKLLGK
EDRPNSKKHKAKDDKKVIKSASQDRFSLEDPTPDIILSSQEPIDPLVMGKYTQRLHSE
VRGLLDTLVTDLMVLADELSPIKNVEEALRLCR"
BASE COUNT 831 a 774 c 838 g 576 t
ORIGIN
1 gcagtggcgg ccgttggctg gcgggtgcgg cgcagcctcg gtgtctctgg gccggcggtg
61 cagggcaacg tttcatggtg ccgggcggca ccatgaagtc tctaaagaag gattcccgcc
121 tcagaataac tccgaccaga ttattagagg cctcagagaa tgtcaaagaa aagaagcggg
181 caaagggacc tgaacaaccc acacccacaa ttcaggaaga gcctgaacct gttagcaatg
241 tcctacaagg agatgacatt cttgccttgg ccattaagaa ggaagacttg aaggagcaac
301 acattcctcg ccttactgaa aaggaagata aacgtgtcat cacccagaaa tttatcatcc
361 gtaaactcaa acccatggat cctaggagga aggtctgcca ccttgtagca cgtcctgcga
421 atcctgatga agccacaaag cctctggact actccggtcc cggtgacagc ttcgatggca
481 gtgaccagat cctgccccac cacatcttgg ggagtctcca ggattttaag agaattgcac
541 ttgctcgagg gaacacccag ctggctgagc ggatacctac ctcaccctgt ctgatgaccc
601 tcatctctgc tgaaggagag tcaaagcaaa aagccccaaa agaagagaag agacctccct
661 gggccccacc tcctcagcac aactttctga aaaactggca gcgtaacaca gccctgcgga
721 agaagcagca ggaagccctc agcgaacacc taaagaagcc agtgagtgag ctgctcatgc
781 acaccgggga gacctacaga cggatccagg aggagcggga gctcattgac tgcacacttc
841 caacccggcg tgataggaaa agctgggaga acagtgggtt ctggagtcga ctggaatact
901 tgggagatga gatgacaggt ctggtcatga ccaagacaaa aactcagcgt ggcctcatgg
961 agcccatcac tcacatcagg aagccccact ccatccgggt ggagacagga ttaccagccc
1021 agagggacgc ttcataccgc tacacctggg atcggagtct gtttctgatc taccgacgca
1081 aggagctgca gagaatcatg gaagagctgg atttcagcca gcaggatatt gatggcctgg
1141 aggtggtggg caaagggtgg cccttctcgg ctgttactgt ggaagactac acagtgtttg
1201 aaagaagtca gggaagctcc tctgaagaca caacatactt aggcacattg gccagttcct
1261 ctgatgtctc catgcctatt ctcggccctt ctctgctgtt ctgtgggaag ccagcttgct
1321 ggatcagagg cagtaatcca caggacaaga ggcaggttgg gattgctgct cacttgacct
1381 ttgaaaccct agaaggcgag aaaacctcct cagaactgac tgtggtcaat aatggcaccg
1441 tggccatttg gtatgactgg cgacggcagc accagccgga cactttccaa gaccttaaga
1501 aaaacaggat gcagcgattt tactttgaca accgggaagg tgtgattctg cctggagaaa
1561 ttaaaacatt taccttcttc ttcaagtctt tgactgctgg ggtcttcagg gaattttggg
1621 agtttcgaac ccatcctact ctattaggag gtgctatact gcaggtcaat ctccacgcgg
1681 tctccctgac ccaggacgtt tttgaggatg agaggaaagt actggagagc aagctgactg
1741 cccatgaggc agtcaccgtc gttcgcgaag tgctgcagga gctgctgatg ggggtcttga
1801 ccccggagcg cacaccatca cctgtggatg cctatctcac cgaggaagac ttgttccggc
1861 acagaaatcc tccgctgcat tatgagcacc aagtggtgca aagcctgcac caactgtggc
1921 gccagtacat gaccctgccc gccaaggctg aggaggccag gccaggggac aaggagcacg
1981 tcagccccat agccacggag aaggcctctg tgaatgctga gctgttacca cgctttagga
2041 gccccatctc cgaaactcaa gtgccccggc ctgagaacga ggccctcagg gaatccgggt
2101 cccagaaggc cagagtgggg accaagagtc ctcagtggaa gagcatcatg gaggagatcc
2161 tggtggagga aagcccagat gtggacagca ccaagagccc ctgggagccg gatggccttc
2221 ccctgctgga gtggaacctc tgcttggagg acttcagaaa ggcagtgatg gtgctccctg
2281 atgagaacca cagagaggat gcgttgatga ggctcaacaa agcagccctg gagctgtgcc
2341 agaagccaag gccattgcag tccaacctcc tgcaccagat gtgtttgcag ctgtggcgag
2401 atgtgattga cagcctggtg ggccattcca tgtggctgag gtctgtgctg ggcctgcctg
2461 agaaggagac catctatttg aatgtgcctg aagagcaaga tcaaaaatca cctcctatca
2521 tggaagtgaa ggtacctgtg gggaaagctg ggaaggagga gcggaaagga gcagcccagg
2581 aaaagaagca actggggatc aaagacaaag aagacaagaa aggagccaag ctgctcggga
2641 aagaggaccg tcccaacagc aagaagcaca aggcaaagga tgacaagaaa gtcataaaat
2701 ctgcaagtca ggacaggttt tctttggaag accctacccc tgacatcatc ctctcttctc
2761 aagaacccat agaccccctg gtcatgggga aatacaccca gaggctgcac agtgaggtcc
2821 gtgggctgct ggacaccctg gtgaccgacc tgatggtcct ggctgatgag ctcagcccca
2881 taaagaatgt cgaggaggct ttgcgcctct gcaggtgact ctcgggccca agcaaccttc
2941 tggaaaacgg gttaataaat aaatcaataa agaaccttca agtttctaaa aaaaaaaaaa
3001 aagaaaaaaa aaaaaaaaa
//