LOCUS BC028389 3785 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens NODAL modulator 2, mRNA (cDNA clone MGC:33249
IMAGE:4824724), complete cds.
ACCESSION BC028389
VERSION BC028389.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3785)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3785)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: m Column: 14.
FEATURES Location/Qualifiers
source 1..3785
/db_xref="H-InvDB:HIT000091585"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33249 IMAGE:4824724"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3785
/gene="NOMO2"
/gene_synonym="Nomo"
/gene_synonym="PM5"
/db_xref="GeneID:283820"
/db_xref="MIM:609158"
CDS 434..3736
/gene="NOMO2"
/gene_synonym="Nomo"
/gene_synonym="PM5"
/codon_start=1
/product="NOMO2 protein"
/protein_id="AAH28389.1"
/db_xref="GeneID:283820"
/db_xref="MIM:609158"
/translation="MARFAFFKVLPGDYEILATHPTWALKEASTTVRVTNSNANAASP
LIVAGYNVSGSVRSDGEPMKGVKFLLFSSLVTKEDVLGCNVSPVPGFQPQDESLVYLC
YTVSREDGSFSFYSLPSGGYTVIPFYRGERITFDVAPSRLDFTVEHDSLKIEPVFHVM
GFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTKADGSFRLENITTGTYTIHAQKEHLY
FETVTIKIAPNTPQLADIVATGFSVCGRISIIRFPDTVKQMNKYKVVLSSQDKDKSLV
TVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLKPQTFPLTVTDRPVMDVAFVQF
LASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKVNAMTFTFDNVLPGKYKISI
MHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAITLEFYQDGNGRENVGIY
NLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILTLTAIRHHVLGTITTD
KMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQEREKNGNEEGEERM
TKPPVQEMVDELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSMEAVVSGESCPGK
LIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSVGPLHSDLEY
TVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGGLFRSNLL
TQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTAYSCYG
TVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKAEGN
DHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKSE
NLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFTAVGYHK
HITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVGAL
GQAASDNSGPEDAKRQAKKQKTRRTLRLQEEFQLMWCLVPWRGTLGIHLFSSLPFASE
ILLETTATCIHY"
BASE COUNT 943 a 939 c 1014 g 889 t
ORIGIN
1 agcgggccgg cggtgggtct agctggggga ggtcgggcca tgctggtggg ccagggcgcg
61 gggctgctgg ggcccgcggt ggtcaccgcc gcggtggtgc tgctgctgag cggcgtgggg
121 ccggcgcacg gctcggagga catcgtggtg ggctgcggtg gcttcgtcaa gtcggacgtg
181 gagatcaact actcgctcat cgagataaag ctgtacacca agcatgggac tttgaaatac
241 cagacagact gtgcccctaa taatggttac tttatgatcc ctttgtatga taagggggat
301 ttcattctga agattgagcc tcccctaggg tggagttttg agccgacgac cgtggagctc
361 catgtggatg gagtcagtga catctgcaca aagggtgggg acatcaactt tgtcttcact
421 gggttctctg tgaatggcaa ggtttgcatt ttttaaagtt ctgcctggag attatgaaat
481 cctcgcaact catccaacct gggcgttgaa agaggcaagc accacagtgc gtgtaaccaa
541 ctccaatgcc aatgcggcca gtcccctcat agttgctggc tacaatgtgt ctggctctgt
601 ccgaagtgat ggggagccca tgaaaggggt gaagtttctt ctcttttctt ctttagtaac
661 taaagaggat gtcctgggct gcaatgtctc accagtgcct gggttccagc cccaagacga
721 gagtctggtg tatttgtgct acacggtctc cagagaagat ggctcgttct ctttctattc
781 cttgccaagt gggggctaca ctgtgattcc gttctatcga ggggagagga ttacctttga
841 tgtggcgcct tccagacttg acttcacagt ggagcatgac agcttgaaaa tcgagcccgt
901 gttccacgtc atgggattct ccgtcaccgg gagggtcttg aacggacccg aaggagatgg
961 tgttccagaa gcagtagtca ccctgaataa ccaaatcaaa gttaaaacaa aagctgatgg
1021 ctcattccgc cttgagaaca taaccacagg gacatacacc atccatgctc agaaagagca
1081 cctctacttt gaaacggtca ccatcaaaat tgcaccgaac acacctcagc tggctgacat
1141 tgttgcaaca gggttcagtg tctgtggtcg gatatcaatc attcgcttcc cggacaccgt
1201 caagcagatg aataaataca aagttgtcct gtcatctcaa gacaaggaca agtctttggt
1261 caccgtggag acagatgctc atggatcatt ttgttttaaa gcaaaaccag ggacttacaa
1321 agtgcaggtg atggttcctg aggcagaaac cagagcaggg ctgacgttga aaccccagac
1381 atttcctctt actgtgaccg acaggcccgt gatggatgtg gcctttgtac agttcttggc
1441 atcagtttct gggaaagtct cttgtttgga cacctgtggt gacttgctgg tgactctaca
1501 gtccctgagc cgccagggtg agaagcggag cctccagctc tccggcaagg tcaacgccat
1561 gactttcacc tttgacaacg tgctccctgg aaaatacaaa ataagcatca tgcatgagga
1621 ttggtgctgg aagaacaaga gcctggaggt ggaagtgctg gaggatgacg tgtctgcagt
1681 tgagttcagg cagacgggct acatgctgag atgttccctg tctcacgcca tcactctgga
1741 attttatcag gatggaaatg ggcgtgagaa tgtggggatt tataacctct ccaaaggagt
1801 caaccgattc tgcctgtcca agcctggtgt gtacaaagtg acccctcgct cctgccaccg
1861 gtttgagcaa gcgttctaca cctatgacac gtcttcacct agtatcttga cattgacagc
1921 cattcgccac catgtccttg gaactatcac caccgacaaa atgatggatg tcactgtgac
1981 tatcaagtct tccatcgaca gtgaacccgc cttggtctta ggccctctga agtctgtgca
2041 ggagctgcgg agggagcagc agctggctga gatcgaggcc cgcaggcagg agagggagaa
2101 aaacggcaat gaggaaggtg aagaaagaat gaccaagcct cccgtgcagg agatggtaga
2161 tgagttacaa ggccccttct cgtatgattt ctcttactgg gcgcggtctg gagagaaaat
2221 cactgttaca ccgtcatcta aagagctgct cttttatccc ccttcaatgg aagccgttgt
2281 cagtggagaa agctgcccag ggaagctgat cgagatccac gggaaggcag gcctgttttt
2341 agaaggccag atccaccccg agttggaagg agtcgagatt gtcatcagtg aaaagggggc
2401 aagttcaccg ctgatcacag tctttactga tgacaaaggt gcctacagtg ttggccccct
2461 gcacagtgac ctggagtaca cggtgacctc acagaaggag ggctatgttc tgactgcagt
2521 ggaaggaacc atcggagact tcaaggccta tgccctggca ggcgtaagct ttgagataaa
2581 agctgaggat gaccagcccc tcccgggagt cctcttatcc ctgagtggtg gcctgtttcg
2641 ttccaacctc ttgacccagg acaacggcat tctgacattc tcaaacctga gccctggcca
2701 gtattacttc aaacccatga tgaaggagtt ccggtttgag ccatcctcac agatgatcga
2761 ggtgcaggaa ggccagaacc tgaagatcac catcacgggg taccgaaccg cttacagttg
2821 ctatggcaca gtgtcttcct taaacggaga gcccgaacaa ggggttgcca tggaagcggt
2881 gggccagaac gactgcagca tttacggaga agacaccgtg acagacgaag agggcaagtt
2941 cagattacgt ggattgctgc cgggatgtgt gtaccacgtt cagctcaagg cagaaggcaa
3001 cgaccacatt gagcgggcgc tcccccacca tagggtgatt gaggttggga ataatgacat
3061 cgatgatgta aacatcatag ttttccggca gattaatcaa tttgatttaa gtggaaatgt
3121 gatcacttcc tctgaatacc ttcctacgtt atgggtcaag ctttacaaaa gcgaaaacct
3181 cgacaatcca atccagacag tttcccttgg ccagtccctg ttcttccatt tccccccact
3241 gctcagagat ggcgagaact atgttgtgct tctggactcc acactcccca gatcccagta
3301 tgactacatc ttgcctcaag tttctttcac cgcagtgggc taccataaac acatcacctt
3361 gatttttaat cccacgagga agctgcctga acaggacatc gcacaaggat cctacattgc
3421 cctgccattg acgctgctgg ttctgctggc cggttacaac catgacaagc tcattccttt
3481 gctgctgcag ttgacaagcc ggctacaggg agtcggcgcg ctcggccagg cagcctctga
3541 caatagcggc ccagaagatg caaagagaca agccaagaaa cagaagacaa ggcggaccct
3601 tcgtttgcaa gaagagttcc agttgatgtg gtgtttggtt ccatggcggg gtaccctagg
3661 gattcatctg ttttcttcac ttccctttgc atctgagatc ctgctggaaa ccacggcaac
3721 ctgtatccac tattaggagg taaaaatcaa taaaatggcc cattcatttg aaaaaaaaaa
3781 aaaaa
//