LOCUS BC028360 3055 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens RIO kinase 3 (yeast), mRNA (cDNA clone MGC:26362 IMAGE:4828351), complete cds. ACCESSION BC028360 VERSION BC028360.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3055) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3055) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 34 Row: d Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22325376 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..3055 /db_xref="H-InvDB:HIT000091577" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26362 IMAGE:4828351" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3055 /gene="RIOK3" /db_xref="GeneID:8780" /db_xref="HGNC:HGNC:11451" /db_xref="MIM:603579" CDS 154..1428 /gene="RIOK3" /codon_start=1 /product="RIOK3 protein" /protein_id="AAH28360.1" /db_xref="GeneID:8780" /db_xref="HGNC:HGNC:11451" /db_xref="MIM:603579" /translation="MDLVGVASPEPGTAAAWGPSKCPWAIPQNTISCSLADVMSEQLA KELQLEEEAAVFPEVAVAEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQLRREKKK FNGDSKVSISFENYRKVHPYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFIGKGK DITTKHDEVVCGRKNTARMENFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSA RLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDE KEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMH NLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHL MRQLYHECTLVHADLSEYNMLWHAGKVRSTFC" BASE COUNT 964 a 572 c 676 g 843 t ORIGIN 1 agcggcggac gcggccgccg ccgtcgccgc catctgtcac ctccactccg gcatcagcag 61 ccagtcgccc gtgtcccgcc tgtctcctcg gcggagcctg ctgcccgtcc tgccacctct 121 ctgctctgtt cttgtctctg ccttcattcc cgaatggatc tggtaggagt ggcatcgcct 181 gagcccggga cggcagcggc ctggggaccc agcaagtgtc catgggctat tcctcaaaat 241 acaatatctt gttctttggc tgatgtaatg agtgaacagc tggccaaaga attgcagtta 301 gaagaagaag ctgccgtttt tcctgaagtt gctgttgctg aaggaccatt tattactgga 361 gaaaacattg atacttccag tgaccttatg ctggctcaga tgctacagat ggaatatgac 421 agagaatatg atgcacagct taggcgtgaa aaaaaaaaat tcaatggaga tagcaaagtt 481 tccatttcct ttgaaaatta tcgaaaagtg catccttatg aagacagcga tagctctgaa 541 gatgaggttg actggcagga tactcgtgat gatccctaca gaccagcaaa accggttccc 601 actcctaaaa agggctttat tggaaaagga aaagatatca ccaccaaaca tgatgaagta 661 gtatgtggga gaaagaacac agcaagaatg gaaaattttg cacctgagtt tcaggtagga 721 gatggaattg gaatggattt aaaactatca aaccatgttt tcaatgcttt aaaacaacat 781 gcctactcag aagaacgtcg aagtgcccgc ctacatgaga aaaaggagca ttctacagca 841 gaaaaagcag ttgatcctaa gacacgttta cttatgtata aaatggtcaa ctctggaatg 901 ttggagacaa tcactggctg tattagtaca ggaaaggagt ctgttgtctt tcatgcatat 961 ggagggagca tggaggatga aaaggaagat agtaaagtta tacctacaga atgtgccatc 1021 aaggtattta aaacaaccct taatgaattt aagaatcgtg acaaatatat taaagatgat 1081 ttcaggttta aagatcgctt cagtaaacta aatccacgta agatcatccg catgtgggca 1141 gaaaaagaaa tgcacaatct cgcaagaatg cagagagctg gaattccttg tccaacagtt 1201 gtactactga agaaacacat tttagttatg tcttttattg gccatgatca agttccagcc 1261 cctaaattaa aagaagtaaa gctcaatagt gaagaaatga aagaagccta ctatcaaact 1321 cttcatttga tgcggcagtt atatcatgaa tgtacgcttg tccatgctga cctcagtgag 1381 tataacatgc tgtggcatgc tggaaaggtg aggagcacat tttgttaaca ttcagattta 1441 attactgtaa gtaaaattta aaatgtaaat acatcagttc atgttctgta ttgaaatagg 1501 tctggttgat cgatgtcagt cagtcagtag aacctaccca ccctcacggc ctggagttct 1561 tgttccggga ctgcaggaat gtctcgcagt ttttccagaa aggaggagtc aaggaagccc 1621 ttagtgaacg agaactcttc aatgctgttt caggcttaaa catcacagca gataatgaag 1681 ctgatttttt agctgagata gaagctttgg agaaaatgaa tgaagatcac gttcagaaga 1741 atggaaggaa agctgcttca tttttgaaag atgatggaga cccaccacta ctatatgatg 1801 aatagcacta atacccactg cttcagtgtt aacacagcag tgattgtcag ctgccaatag 1861 caaatgaagt tatgggtgac ttgaaatacc aaaacctgag gagtgggcaa tggtgcttct 1921 gtgcttttcc cccttgtaac ccatgtgcca gatgtgtgga atttttagct cagcattgag 1981 agaataaaat gtcactacct ctcatcttat gaacaggata atataattct ttaacagcta 2041 taggttatct ggctgaagta gacctaattt tatgtgactt gtggtgtaaa atgtcttgat 2101 gataattttt aaaacttggg taacacttcc aaatatggga ggaaaggaca gatgtgttta 2161 caagggagga ttttacaaca tacttgcttt attcacctcc ctgttttgtg ttgcgtcttt 2221 ccttgaatat tttattggcc cagagttagc ctttctcaat tatgtttcca gactgtggcc 2281 gtgattctaa aggaaaatgt gtgctcttta gtgggtagaa caaatggaaa tttggtttca 2341 gaatggctga cagaaatcga cataagtcat gtaatttttg ttgatatatc atgaaaatga 2401 acagaattct ttttccatac ttatatctaa gaaaaggcat cataggtttc tgaaagagat 2461 aactatataa cagcttttta actatccagt caactttcag cttttctaca tttaggtaaa 2521 atggttagga tataactcat ggtgtggcta atctacattt atcaataaaa tgtaaattat 2581 ctgaaaggac agaatataag atttaaccat gtttgacgta ttttaattta gttaatgaag 2641 caaaattcag tttatatttc actagaactg tgtacttgat tgattttcag agaaatatca 2701 caaattagaa atattaaatc taaggatgaa aggtatatat aaaacaattt gggggccagg 2761 cacgatggct caaacctgta atcccagcac tttgggagac caaggcgggt ggatcacttg 2821 aggtcaggag ttcaagacca gcctgggcaa catggcgaaa ccctgtctct actaaaaata 2881 caaaaattag ccgggtgtgg tggcacttct ctgtaatctc agcttctcag gaggctgaga 2941 caggagaatc gcttgaaccc gggaggcaga ggttgcagtg agctgagatc atgccactgc 3001 actccggcct aggtgacaga gggaaactcc atctccagga aaaaaaaaaa aaaaa //