LOCUS BC028313 2214 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens solute carrier family 22 (organic cation/ergothioneine
transporter), member 4, mRNA (cDNA clone MGC:34546 IMAGE:5186192),
complete cds.
ACCESSION BC028313
VERSION BC028313.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2214)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24497489.
FEATURES Location/Qualifiers
source 1..2214
/db_xref="H-InvDB:HIT000040520"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34546 IMAGE:5186192"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2214
/gene="SLC22A4"
/gene_synonym="OCTN1"
/db_xref="GeneID:6583"
/db_xref="HGNC:HGNC:10968"
/db_xref="MIM:604190"
CDS 166..1821
/gene="SLC22A4"
/gene_synonym="OCTN1"
/codon_start=1
/product="solute carrier family 22 (organic
cation/ergothioneine transporter), member 4"
/protein_id="AAH28313.1"
/db_xref="GeneID:6583"
/db_xref="HGNC:HGNC:10968"
/db_xref="MIM:604190"
/translation="MRDYDEVIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAG
TPEHRCRVPDAANLSSAWRNNSVPLRLRDGREVPHSCSRYRLATIANFSALGLEPGRD
VDLGQLEQESCLDGWEFSQDVYLSTVVTEWNLVCEDNWKVPLTTSLFFVGVLLGSFVS
GQLSDRFGRKNVLFATMAVQTGFSFLQIFSISWEMFTVLFVIVGMGQISNYVVAFILG
TEILGKSVRIIFSTLGVCTFFAVGYMLLPLFAYFIRDWRMLLLALTVPGVLCVPLWWF
IPESPRWLISQRRFREAEDIIQKAAKMNNIAVPAVIFDSVEELNPLKQQKAFILDLFR
TRNIAIMTIMSLLLWMLTSVGYFALSLDAPNLHGDAYLNCFLSALIEIPAYITAWLLL
RTLPRRYIIAAVLFWGGGVLLFIQLVPVDYYFLSIGLVMLGKFGITSAFSMLYVFTAE
LYPTLVRNMAVGVTSTASRVGSIIAPYFVYLGAYNRMLPYIVMGSLTVLIGILTLFFP
ESLGMTLPETLEQMQKVKWFRSGKKTRDSMETEENPKVLITAF"
BASE COUNT 541 a 561 c 538 g 574 t
ORIGIN
1 cctgtttccc aggaacggtc cccggcttcg cgccccaatt tctaacagcc tgcctgtccc
61 ccgggaacgt tctaacatcc ttggggagcg ccccagctac aagacactgt cctgagaacg
121 ctgtcatcac ccgtagttgc aagtttcgga gcggcagtgg gaagcatgcg ggactacgac
181 gaggtgatcg ccttcctggg cgagtggggg cccttccagc gcctcatctt cttcctgctc
241 agcgccagca tcatccccaa tggcttcaat ggtatgtcag tcgtgttcct ggcggggacc
301 ccggagcacc gctgtcgagt gccggacgcc gcgaacctga gcagcgcctg gcgcaacaac
361 agtgtcccgc tgcggctgcg ggacggccgc gaggtgcccc acagctgcag ccgctaccgg
421 ctcgccacca tcgccaactt ctcggcgctc gggctggagc cggggcgcga cgtggacctg
481 gggcagctgg agcaggagag ctgcctggat ggctgggagt tcagccagga cgtctacctg
541 tccaccgtcg tgaccgagtg gaatctggtg tgtgaggaca actggaaggt gcccctcacc
601 acctccctgt tcttcgtagg cgtgctcctc ggctccttcg tgtccgggca gctgtcagac
661 aggtttggca ggaagaacgt tctcttcgca accatggctg tacagactgg cttcagcttc
721 ctgcagattt tctccatcag ctgggagatg ttcactgtgt tatttgtcat cgtgggcatg
781 ggccagatct ccaactatgt ggtagccttc atactaggaa cagaaattct tggcaagtca
841 gttcgtatta tattctctac attaggagtg tgcacatttt ttgcagttgg ctatatgctg
901 ctgccactgt ttgcttactt catcagagac tggcggatgc tgctgctggc gctgacggtg
961 ccgggagtgc tgtgtgtccc gctgtggtgg ttcattcctg aatctccccg atggctgata
1021 tcccagagaa gatttagaga ggctgaagat atcatccaaa aagctgcaaa aatgaacaac
1081 atagctgtac cagcagtgat atttgattct gtggaggagc taaatcccct gaagcagcag
1141 aaagctttca ttctggacct gttcaggact cggaatattg ccataatgac cattatgtct
1201 ttgctgctat ggatgctgac ctcagtgggt tactttgctc tgtctctgga tgctcctaat
1261 ttacatggag atgcctacct gaactgtttc ctctctgcct tgattgaaat tccagcttac
1321 attacagcct ggctgctatt gcgaaccctg cccaggcgtt atatcatagc tgcagtactg
1381 ttctggggag gaggtgtcct tctcttcatt caactggtac ctgtggatta ttacttctta
1441 tccattggtc tggtcatgct gggaaaattt gggatcacct ctgctttctc catgctgtat
1501 gtcttcactg ctgagctcta cccaaccctg gtcaggaaca tggcggtggg ggtcacatcc
1561 acggcctcca gagtgggcag catcattgcc ccctactttg tttacctcgg tgcttacaac
1621 agaatgctgc cctacatcgt catgggtagt ctgactgtcc tgattggaat cctcaccctt
1681 tttttccctg aaagtttggg aatgactctt ccagaaacct tagagcagat gcagaaagtg
1741 aaatggttca gatctgggaa aaaaacaaga gactcaatgg agacagaaga aaatcccaag
1801 gttctaataa ctgcattctg aaaaaatatc taccccattt ggtgaagtga aaaacagaaa
1861 aataagaccc tgtggagaaa ttcgttgttc ccactgaaat ggactgactg taacgattga
1921 caccaaaatg aaccttgcta tcaagaaatg ctcgtcatac agtaaactct ggatgattct
1981 tccagataat gtccttgctt tacaaaccaa ccatttctag agagtctcct tactcattaa
2041 ttcaatgaaa tggattggta agatgtcttg aaaacatgtt agtcaaggac tggtaaaata
2101 catataaaga ttaacactca tttccaatca tacaaatact atccaaataa aaataacatc
2161 attgtattaa cgcaaatatt aggtgacaac aaaaaaaaaa aaaaaaaaaa aaaa
//