LOCUS BC028311 2157 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dopachrome tautomerase (dopachrome delta-isomerase,
tyrosine-related protein 2), mRNA (cDNA clone MGC:21343
IMAGE:4705935), complete cds.
ACCESSION BC028311
VERSION BC028311.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2157)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2157)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: k Column: 24.
FEATURES Location/Qualifiers
source 1..2157
/db_xref="H-InvDB:HIT000040519"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21343 IMAGE:4705935"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2157
/gene="DCT"
/db_xref="GeneID:1638"
/db_xref="HGNC:HGNC:2709"
/db_xref="MIM:191275"
CDS 275..1834
/gene="DCT"
/codon_start=1
/product="dopachrome tautomerase (dopachrome
delta-isomerase, tyrosine-related protein 2)"
/protein_id="AAH28311.1"
/db_xref="GeneID:1638"
/db_xref="HGNC:HGNC:2709"
/db_xref="MIM:191275"
/translation="MSPLWWGFLLSCLGCKILPGAQGQFPRVCMTVDSLVNKECCPRL
GAESANVCGSQQGRGQCTEVRADTRPWSGPYILRNQDDRELWPRKFFHRTCKCTGNFA
GYNCGDCKFGWTGPNCERKKPPVIRQNIHSLSPQEREQFLGALDLAKKRVHPDYVITT
QHWLGLLGPNGTQPQFANCSVYDFFVWLHYYSVRDTLLGPGRPYRAIDFSHQGPAFVT
WHRYHLLCLERDLQRLIGNESFALPYWNFATGRNECDVCTDQLFGAARPDDPTLISRN
SRFSSWETVCDSLDDYNHLVTLCNGTYEGLLRRNQMGRNSMKLPTLKDIRDCLSLQKF
DNPPFFQNSTFSFRNALEGFDKADGTLDSQVMSLHNLVHSFLNGTNALPHSAANDPIF
VVLHSFTDAIFDEWMKRFNPPADAWPQELAPIGHNRMYNMVPFFPPVTNEELFLTSDQ
LGYSYAIDLPVSVEETPGWPTTLLVVMGTLVALVGLFVLLAFLQYRRLRKGYTPLMET
HLSSKRYTEEA"
BASE COUNT 598 a 489 c 504 g 566 t
ORIGIN
1 ctcattaaat ttggttgtta gaggcgcttc taaggaaatt aagtctgtta gttgtttgaa
61 tcacataaaa ttgtgtgtgc acgttcatgt acacatgtgc acacatgtaa cctctgtgat
121 tcttgtgggt atttttttaa gaagaaagga atagaaagca aagaaaaata aaaaatactg
181 aaaagaaaag actgaaagag tagaagataa ggagaaaagt acgacagaga caaggaaagt
241 aagagagaga gagagctctc ccaattataa agccatgagc cccctttggt gggggtttct
301 gctcagttgc ttgggctgca aaatcctgcc aggagcccag ggtcagttcc cccgagtctg
361 catgacggtg gacagcctag tgaacaagga gtgctgccca cgcctgggtg cagagtcggc
421 caatgtctgt ggctctcagc aaggccgggg gcagtgcaca gaggtgcgag ccgacacaag
481 gccctggagt ggtccctaca tcctacgaaa ccaggatgac cgtgagctgt ggccaagaaa
541 attcttccac cggacctgca agtgcacagg aaactttgcc ggctataatt gtggagactg
601 caagtttggc tggaccggtc ccaactgcga gcggaagaaa ccaccagtga ttcggcagaa
661 catccattcc ttgagtcctc aggaaagaga gcagttcttg ggcgccttag atctcgcgaa
721 gaagagagta caccccgact acgtgatcac cacacaacac tggctgggcc tgcttgggcc
781 caatggaacc cagccgcagt ttgccaactg cagtgtttat gatttttttg tgtggctcca
841 ttattattct gttagagata cattattagg accaggacgc ccctacaggg ccatagattt
901 ctcacatcaa ggacctgcat ttgttacctg gcaccggtac catttgttgt gtctggaaag
961 agatctccag cgactcattg gcaatgagtc ttttgctttg ccctactgga actttgccac
1021 tgggaggaac gagtgtgatg tgtgtacaga ccagctgttt ggggcagcga gaccagacga
1081 tccgactctg attagtcgga actcaagatt ctccagctgg gaaactgtct gtgatagctt
1141 ggatgactac aaccacctgg tcaccttgtg caatggaacc tatgaaggtt tgctgagaag
1201 aaatcaaatg ggaagaaaca gcatgaaatt gccaacctta aaagacatac gagattgcct
1261 gtctctccag aagtttgaca atcctccctt cttccagaac tctaccttca gtttcaggaa
1321 tgctttggaa gggtttgata aagcagatgg gactctggat tctcaagtga tgagccttca
1381 taatttggtt cattccttcc tgaacgggac aaacgctttg ccacattcag ccgccaatga
1441 tcccattttt gtggttcttc attcctttac tgatgccatc tttgatgagt ggatgaaaag
1501 atttaatcct cctgcagatg cctggcctca ggagctggcc cctattggtc acaatcggat
1561 gtacaacatg gttcctttct tccctccagt gactaatgaa gaactctttt taacctcaga
1621 ccaacttggc tacagctatg ccatcgatct gccagtttca gttgaagaaa ctccaggttg
1681 gcccacaact ctcttagtag tcatgggaac actggtggct ttggttggtc tttttgtgct
1741 gttggctttt cttcaatata gaagacttcg aaaaggatat acacccctaa tggagacaca
1801 tttaagcagc aagagataca cagaagaagc ctagggtgct catgccttac ctaagagaag
1861 aggctggcca agccacagtt ctgacgctga caataaagga actaatcctc actgttcctt
1921 cttgagttga agatctttga cataggttct tctatagtga tgatgatctc attcagaaga
1981 tgcttagctg tagtttccgc tttgcttgct tgtttaacaa acccaactaa agtgcttgag
2041 gctacctcta ccttcaaata aagatagacc tgacaatttg tgatatctaa taataacccc
2101 cccccaatat tgattaagcc tcctcctttt ctgaaagcat ttaaaaaaaa aaaaaaa
//