LOCUS BC028297 951 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, Na+/K+ transporting, alpha 4 polypeptide, mRNA
(cDNA clone IMAGE:4479617), complete cds.
ACCESSION BC028297
VERSION BC028297.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 951)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 951)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: d Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49249976
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..951
/db_xref="H-InvDB:HIT000040514"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4479617"
/tissue_type="Bladder, transitional cell papilloma"
/clone_lib="NIH_MGC_93"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..951
/gene="ATP1A4"
/gene_synonym="ATP1A1"
/gene_synonym="MGC25056"
/db_xref="GeneID:480"
/db_xref="HGNC:HGNC:14073"
/db_xref="MIM:607321"
CDS 111..608
/gene="ATP1A4"
/gene_synonym="ATP1A1"
/gene_synonym="MGC25056"
/codon_start=1
/product="ATPase, Na+/K+ transporting, alpha 4
polypeptide"
/protein_id="AAH28297.1"
/db_xref="GeneID:480"
/db_xref="HGNC:HGNC:14073"
/db_xref="MIM:607321"
/translation="MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSY
GQQWTYEQRKVVEFTCQTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILE
ETLLAAFLSYTPGMDVALRMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVE
RETYY"
BASE COUNT 279 a 227 c 238 g 207 t
ORIGIN
1 caccagccca gccagaagca agtcccagcc cccagccctc ccctggccta ccttttgggg
61 cccttctctg aaccaggctc ccctgtcctg caactctgtc attcacaggg atgatccagg
121 ctctggctgg attctttacc tactttgtaa tcctggctga gaatggtttt aggcctgttg
181 atctgctggg catccgcctc cactgggaag ataaatactt gaatgacctg gaggacagct
241 acggacagca gtggacctat gagcaacgaa aagttgtgga gttcacatgc caaacggcct
301 tttttgtcac catcgtggtt gtgcagtggg cggatctcat catctccaag actcgccgca
361 actcactttt ccagcagggc atgagaaaca aagtcttaat atttgggatc ctggaggaga
421 cactcttggc tgcatttctg tcctacactc caggcatgga cgtggccctg cgaatgtacc
481 cactcaagat aacctggtgg ctctgtgcca ttccctacag tattctcatc ttcgtctatg
541 atgaaatcag aaaactcctc atccgtcagc acccggatgg ctgggtggaa agggagacgt
601 actactaaac tcagcagatg aagagcttca tgtgacacag gggtgttgtg agagctggga
661 tggggccaga gattataagt ttgacacaac atctgagaca ctaggatgaa ttatcttgga
721 tgagaaagat gggcaatcct gggctggctt gagggaatca tgggcagagg atgaggtggg
781 ctgaagggaa gcccagcctg catctagctg gagccccgca gggaggggca tggtcctgct
841 gaatcccgta gccagtctag acagtaaatg tctggaaaag ccctcaaaaa aaaaaaaaaa
901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//